Pre_GI Gene

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Host: NC_012967 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012967:12161 Escherichia coli B str. REL606 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli B str. REL606 is unable to use arabinose due to a mutation. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
12161140771917molecular chaperone DnaKQuickGO ontologyBLASTP
14166152961131chaperone protein DnaJQuickGO ontologyBLASTP
15443165551113IS186IS421 transposaseQuickGO ontologyBLASTP
1674916901153small toxic membrane polypeptideQuickGO ontologyBLASTP
17488186541167pH-dependent sodiumproton antiporterQuickGO ontologyBLASTP
1871419619906transcriptional activator NhaRQuickGO ontologyBLASTP
1965820617960hypothetical proteinBLASTP
20630217751146putative usher proteinQuickGO ontologyBLASTP
2220822912705hypothetical proteinBLASTP
2334623621276IS1 protein InsAQuickGO ontologyBLASTP
2354024043504IS1 protein InsBQuickGO ontologyBLASTP
2405424404351hypothetical proteinBLASTP
2470124865165hypothetical proteinBLASTP
248872515026430S ribosomal protein S20QuickGO ontologyBLASTP
2525325471219hypothetical proteinBLASTP
2547926420942bifunctional riboflavin kinaseFMN adenylyltransferaseQuickGO ontologyBLASTP
26463292792817isoleucyl-tRNA synthetaseQuickGO ontologyBLASTP
2927929773495lipoprotein signal peptidaseQuickGO ontologyBLASTP
2989830347450FKBP-type peptidyl-prolyl cis-trans isomerase rotamaseQuickGO ontologyBLASTP
30349312999514-hydroxy-3-methylbut-2-enyl diphosphate reductaseQuickGO ontologyBLASTP
3136532279915ribonucleoside hydrolase RihCQuickGO ontologyBLASTP
3244633267822dihydrodipicolinate reductaseQuickGO ontologyBLASTP