Pre_GI Gene

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Host: NC_009997 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009997:1368471 Shewanella baltica OS195, complete genome

Host Lineage: Shewanella baltica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from the Baltic Sea. A psychrophilic bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species is differentiated from other Shewanella spp. based on its ability to grow at 4 degrees C but not at 37, production of N-acetyl-beta-glucosaminidase, lack of chymotrypsin, and ability to use a variety of complex carbon compounds as carbon and energy sources.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
13684711369406936riboflavin biosynthesis protein RibFQuickGO ontologyBLASTP
136943913722612823isoleucyl-tRNA synthetaseQuickGO ontologyBLASTP
13722711372786516lipoprotein signal peptidaseQuickGO ontologyBLASTP
13727831373205423peptidylprolyl isomerase FKBP-typeQuickGO ontologyBLASTP
13732071374163957hydroxymethylbutenyl pyrophosphate reductaseQuickGO ontologyBLASTP
13743491374936588type IV pilus modification protein PilVQuickGO ontologyBLASTP
13749511375919969type IV pilus assembly protein PilWQuickGO ontologyBLASTP
13759321376393462type IV pilus assembly protein PilXQuickGO ontologyBLASTP
137639613799023507type IV pilin biogenesis protein putativeQuickGO ontologyBLASTP
13799141380306393type IV pilus biogenesis protein PilEQuickGO ontologyBLASTP
13803031380608306hypothetical proteinBLASTP
13807001381194495type IV pilus biogenesis protein putativeQuickGO ontologyBLASTP
13813431381855513type IV pilus biogenesis protein putativeQuickGO ontologyBLASTP
13820971382435339nitrogen regulatory protein P-IIQuickGO ontologyBLASTP
138262213839111290FAD-dependent pyridine nucleotide-disulphide oxidoreductaseQuickGO ontologyBLASTP
138396013849761017transcriptional regulator LacI familyQuickGO ontologyBLASTP
138536313880292667TonB-dependent receptorQuickGO ontologyBLASTP