Pre_GI Gene

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Host: NC_013008 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013008:11938 Escherichia coli O157:H7 str. TW14359 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli O157:H7 str. TW14359 was isolated from spinach during the E. coli outbreak in 2006. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1193812087150hypothetical proteinBLASTP
12180140961917molecular chaperone DnaKQuickGO ontologyBLASTP
14185153151131molecular chaperone DnaJQuickGO ontologyBLASTP
1541915628210regulatory peptideQuickGO ontologyBLASTP
16157173231167pH-dependent sodiumproton antiporterQuickGO ontologyBLASTP
1738318288906transcriptional activator NhaRQuickGO ontologyBLASTP
2176222445684chaperone proteinQuickGO ontologyBLASTP
2249523028534type-1 fimbrial proteinQuickGO ontologyBLASTP
23330247511422non-LEE-encoded type III effectorQuickGO ontologyBLASTP
252212548426430S ribosomal protein S20QuickGO ontologyBLASTP
2558725811225hypothetical proteinBLASTP
2581926760942bifunctional riboflavin kinaseFMN adenylyltransferaseQuickGO ontologyBLASTP
26803296192817isoleucyl-tRNA synthetaseQuickGO ontologyBLASTP
2961930113495lipoprotein signal peptidaseQuickGO ontologyBLASTP
3020130650450FKBP-type peptidylprolyl isomeraseQuickGO ontologyBLASTP
30652316029514-hydroxy-3-methylbut-2-enyl diphosphate reductaseQuickGO ontologyBLASTP
3166832582915ribonucleoside hydrolase RihCQuickGO ontologyBLASTP
3274933570822dihydrodipicolinate reductaseQuickGO ontologyBLASTP
3384933986138hypothetical proteinBLASTP
34026351741149carbamoyl phosphate synthase small subunitQuickGO ontologyBLASTP