Pre_GI: BLASTP Hits

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Query: NC_013716:2476334:2484994 Citrobacter rodentium ICC168, complete genome

Start: 2484994, End: 2485671, Length: 678

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013716:2764550:279183027918302792507678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A5e-130463
NC_013716:3708415:372254337225433723220678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A5e-130463
NC_013716:1138441:114611011461101146787678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A5e-130463
NC_013716:4824541:483553548355354836212678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A5e-130463
NC_013716:2764550:279093027909302791607678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A5e-130463
NC_013716:4306695:431035743103574311034678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A5e-130463
NC_013716:3327881:335750833575083358185678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A5e-130463
NC_009801:3374501:338814533881453388822678Escherichia coli E24377A, complete genomeIS66 family element, orf16e-128456
NC_009790:42112:442404424044917678Escherichia coli E24377A plasmid pETEC_74, complete sequenceIS66 family element, orf16e-128456
NC_013361:3313284:331480333148033315450648Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein5e-122436
NC_013361:3867558:389845438984543898939486Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-89328
NC_009801:1756610:175854817585481759012465Escherichia coli E24377A, complete genomeIS66 family element, orf12e-81301
NC_007385:157516:161897161897162565669Shigella sonnei Ss046 plasmid pSS_046, complete sequenceputative transposase5e-77287
NC_007607:87000:901639016390831669Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceputative transposase7e-76283
NC_014839:68308:881018810188736636Pantoea sp. At-9b plasmid pPAT9B02, complete sequencetransposase IS3/IS911 family protein6e-75280
NC_013716:5201097:526588652658865266536651Citrobacter rodentium ICC168, complete genomeIS679 transposase A1e-57222
NC_014228:2270000:229328422932842293916633Xenorhabdus nematophila ATCC 19061, complete genomeputative transposase3e-57221
NC_013716:5201097:526916752691675269469303Citrobacter rodentium ICC168, complete genome4e-40164
NC_002655:3919545:392180139218013922475675Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by ISEc86e-35147
NC_002695:3852233:385448938544893855163675Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein6e-35147
NC_011353:3956630:395888639588863959560675Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeISSfl4 ORF16e-35147
NC_013008:3911356:391361239136123914286675Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein6e-35147
AP010958:3627355:362961136296113630285675Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein5e-35147
AP010958:5090696:511675551167555117429675Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein5e-35147
NC_011601:3338888:334114433411443341818675Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransposase Orf1 of IS6835e-35147
NC_013353:3627355:362961136296113630285675Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein5e-35147
NC_013353:5090696:511675551167555117429675Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein5e-35147
NC_004851:157675:173438173438174112675Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceISSfl4 ORF11e-34146
NC_004337:3590323:385190438519043852578675Shigella flexneri 2a str. 301, complete genomeISSfl4 ORF11e-34146
NC_013941:3676146:367840236784023679076675Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeISSfl3 OrfA3e-34145
NC_008258:401786:423776423776424450675Shigella flexneri 5 str. 8401, complete genomeISSfl4 ORF16e-34144
NC_008258:2045000:205991720599172060591675Shigella flexneri 5 str. 8401, complete genomeISSfl4 ORF16e-34144
NC_004337:367687:386125386125386799675Shigella flexneri 2a str. 301, complete genomeISSfl4 ORF16e-34144
NC_017319:155958:169634169634170308675Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceISSfl4 ORF16e-34144
NC_017328:385552:403989403989404663675Shigella flexneri 2002017 chromosome, complete genomeISSfl4 ORF16e-34144
NC_017319:155958:173413173413174042630Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceISSfl4 ORF14e-33141
NC_004851:157675:169705169705170379675Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceISSfl4 ORF14e-33141
NC_008253:4735418:477367147736714773937267Escherichia coli 536, complete genomehypothetical protein1e-31135
NC_007607:87000:116076116076116663588Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceISSfl4 ORF12e-26119
NC_007941:11319:331303313033534405Escherichia coli UTI89 plasmid pUTI89, complete sequencehypothetical protein5e-23107
NC_004431:3409389:341047334104733410877405Escherichia coli CFT073, complete genomeUnknown protein encoded by ISEc8 within prophage5e-23107
NC_016845:2274500:229580922958092296213405Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein2e-22105
NC_004741:366822:385926385926386423498Shigella flexneri 2a str. 2457T, complete genomeISSfl3 orfA4e-21101
NC_002655:2264773:227763922776392278040402Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded in ISEc84e-1995.1
NC_004431:3409389:342716934271693427570402Escherichia coli CFT073, complete genomeUnknown protein encoded by ISEc8 within prophage4e-1995.1
NC_002695:4584177:458605945860594586460402Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein4e-1995.1
AP010958:3853082:387813638781363878537402Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein4e-1995.1
NC_002655:4653160:465504246550424655443402Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by ISEc8 within prophage CP-933L4e-1995.1
NC_011745:333061:335652335652336053402Escherichia coli ED1a chromosome, complete genomeputative transposase, IS3 family4e-1995.1
NC_013008:1307392:132773213277321328133402Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein4e-1995.1
NC_013353:3853082:387813638781363878537402Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein4e-1995.1
NC_013361:1284579:130444313044431304844402Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein4e-1995.1
NC_010660:86445:950599505995448390Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceIS66 family element, orf15e-1994.7
NC_010660:33109:446374463745026390Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceIS66 family element, orf15e-1994.7
NC_013008:4643825:464522546452254645605381Escherichia coli O157:H7 str. TW14359 chromosome, complete genometransposase, ISEc85e-1994.7
NC_002695:1794635:180913718091371809517381Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein5e-1994.7
NC_002695:3468873:348280134828013483181381Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein5e-1994.7
NC_002695:1364833:138386013838601384261402Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein4e-1994.7
NC_013008:1715831:172970317297031730104402Escherichia coli O157:H7 str. TW14359 chromosome, complete genometransposase4e-1994.7
NC_013008:3525428:354178635417863542187402Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein4e-1994.7
NC_009790:42112:671896718967578390Escherichia coli E24377A plasmid pETEC_74, complete sequenceIS66 family element4e-1994.7
NC_009801:1392696:140961714096171410006390Escherichia coli E24377A, complete genomeIS66 family element, orf14e-1994.7
NC_009801:1756610:176096717609671761356390Escherichia coli E24377A, complete genomeIS66 family element, orf14e-1994.7
NC_009801:2898426:294035029403502940739390Escherichia coli E24377A, complete genomeIS66 family element, orf14e-1994.7
NC_009788:16360:182921829218681390Escherichia coli E24377A plasmid pETEC_73, complete sequenceIS66 family element, orf14e-1994.7
NC_016822:2940000:295990729599072960308402Shigella sonnei 53G, complete genomehypothetical protein4e-1891.3
CU928145:4792703:479270347927034793128426Escherichia coli 55989 chromosome, complete genomeputative transposase OrfA from plasmid origin1e-1583.2
NC_011748:4792703:479270347927034793128426Escherichia coli 55989, complete genomeputative transposase OrfA from plasmid origin1e-1583.2
CP002797:4603787:462158746215874622012426Escherichia coli NA114, complete genomeIS-66 transposase2e-1582.8
AP010958:5090696:509396850939685094393426Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein8e-1580.5
AP010958:3627355:365264736526473653072426Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein8e-1580.5
NC_013353:3627355:365264736526473653072426Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein8e-1580.5
NC_013353:5090696:509396850939685094393426Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein8e-1580.5
NC_013941:3676146:370144037014403701865426Escherichia coli O55:H7 str. CB9615 chromosome, complete genometransposase-like protein8e-1580.5
NC_011601:3338888:336418933641893364614426Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransposase Orf1 of IS6823e-1479
NC_008253:334467:350210350210350572363Escherichia coli 536, complete genomeputative IS orf3e-1375.5
NC_011745:4862218:486790848679084868333426Escherichia coli ED1a chromosome, complete genomeputative transposase3e-1272
NC_010660:33109:376623766238081420Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceIS66 family element, orf14e-1271.6
NC_011751:3453683:350329135032913503716426Escherichia coli UMN026 chromosome, complete genomeputative transposase2e-1169.7
NC_007951:769500:778440778440778835396Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase2e-1169.3
NC_014029:331919:392963392963393319357Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-1169.3
NC_007951:4576825:458212245821224582559438Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase2e-1065.9
NC_014539:888562:893145893145893561417Burkholderia sp. CCGE1003 chromosome 1, complete sequencetransposase IS3/IS911 family protein3e-1065.5
NC_013854:513196:530041530041530433393Azospirillum sp. B510, complete genometransposase2e-0963.2
NC_013857:478000:483261483261483653393Azospirillum sp. B510 plasmid pAB510c, complete sequencetransposase2e-0963.2
NC_013856:692000:697285697285697677393Azospirillum sp. B510 plasmid pAB510b, complete sequencetransposase2e-0963.2
NC_012791:721813:725621725621726007387Variovorax paradoxus S110 chromosome 1, complete genometransposase IS3/IS911 family protein2e-0962.8
NC_007946:4779745:481483048148304815192363Escherichia coli UTI89, complete genomehypothetical protein2e-0962.8
NC_016588:133943:143939143939144331393Azospirillum lipoferum 4B plasmid AZO_p6, complete sequenceputative transposase, IS66 family2e-0962.4
NC_016822:2940000:294140529414052941602198Shigella sonnei 53G, complete genomehypothetical protein2e-0962.4
NC_011002:703194:719199719199719606408Burkholderia cenocepacia J2315 chromosome 3, complete sequenceputative transposase2e-0962.4
NC_009524:1796000:180997918099791810386408Psychrobacter sp. PRwf-1 chromosome, complete genometransposase IS3/IS911 family protein3e-0962
CU928159:30700:331343313433571438Escherichia coli str. 55989 plasmid 55989p, complete genomeconserved hypothetical protein, putative transposase IS3 family3e-0962
NC_011751:3453683:347806134780613478498438Escherichia coli UMN026 chromosome, complete genomeputative transposase3e-0962
NC_004431:3409389:345496234549623455399438Escherichia coli CFT073, complete genomeUnknown in putative ISEc83e-0962
NC_010660:33109:373143731437610297Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence3e-0962
NC_013860:171235:184935184935185363429Azospirillum sp. B510 plasmid pAB510f, complete sequencetransposase4e-0961.6
NC_007651:3064530:314390831439083144315408Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein6e-0961.2
NC_007651:1620000:162740116274011627808408Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein6e-0961.2
NC_007651:3560652:358535335853533585760408Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein6e-0961.2
NC_007651:1620000:164485016448501645257408Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein6e-0961.2
NC_007651:3064530:307232730723273072734408Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein6e-0961.2
NC_007651:72952:833758337583782408Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein6e-0961.2
NC_007651:1620000:163739216373921637799408Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein6e-0961.2
NC_009254:745706:763090763090763524435Burkholderia vietnamiensis G4 chromosome 3, complete sequencetransposase IS3/IS911 family protein1e-0860.1
NC_009255:1105786:111509111150911115525435Burkholderia vietnamiensis G4 chromosome 2, complete sequencetransposase IS3/IS911 family protein1e-0860.1
NC_009256:2907998:291244329124432912877435Burkholderia vietnamiensis G4 chromosome 1, complete sequencetransposase IS3/IS911 family protein1e-0860.1
NC_016588:133943:154640154640155050411Azospirillum lipoferum 4B plasmid AZO_p6, complete sequenceTransposase of ISAli10, IS66 family. ORFA1e-0860.1
CP002797:4775780:479493447949344795296363Escherichia coli NA114, complete genomePutative transposase2e-0859.3
NC_004431:3409389:348025334802533480615363Escherichia coli CFT073, complete genomeUnknown in ISEc82e-0859.3
NC_009078:2718741:275026927502692750664396Burkholderia pseudomallei 1106a chromosome II, complete sequenceTransposase3e-0858.9
NC_007607:87000:116800116800116973174Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequencehypothetical protein3e-0858.5
NC_011000:1262324:128276612827661283161396Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative transposase3e-0858.5
NC_011001:302500:303100303100303495396Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative transposase3e-0858.5
NC_007435:1446916:147844414784441478839396Burkholderia pseudomallei 1710b chromosome II, complete sequenceputative DNA-binding protein5e-0858.2
NC_009254:442360:460991460991461386396Burkholderia vietnamiensis G4 chromosome 3, complete sequencetransposase IS3/IS911 family protein9e-0857
NC_007510:1959883:200343920034392003855417Burkholderia sp. 383 chromosome 1, complete sequencetransposase IS3/IS9111e-0756.6
NC_008253:334467:341569341569341931363Escherichia coli 536, complete genomeputative IS orf2e-0756.2
NC_008061:2106848:212219421221942122595402Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetransposase IS3/IS9113e-0755.5
NC_008543:127675:147175147175147576402Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetransposase IS3/IS911 family protein3e-0755.5
NC_007651:2166000:217506121750612175462402Burkholderia thailandensis E264 chromosome I, complete sequencetransposase3e-0755.5
NC_010515:2691000:270750927075092707910402Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetransposase IS3/IS911 family protein3e-0755.5
NC_010515:2111691:212698321269832127384402Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetransposase IS3/IS911 family protein3e-0755.5
NC_010515:2111691:217327521732752173676402Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetransposase IS3/IS911 family protein3e-0755.5
NC_009254:74000:939439394394362420Burkholderia vietnamiensis G4 chromosome 3, complete sequencetransposase IS3/IS911 family protein4e-0755.1
NC_007651:1620000:164870416487041649069366Burkholderia thailandensis E264 chromosome I, complete sequencetransposase4e-0754.7
NC_007650:84140:105871105871106236366Burkholderia thailandensis E264 chromosome II, complete sequencetransposase4e-0754.7
NC_007651:1726472:173842317384231738788366Burkholderia thailandensis E264 chromosome I, complete sequencetransposase4e-0754.7
NC_007650:420745:440579440579440944366Burkholderia thailandensis E264 chromosome II, complete sequencetransposase4e-0754.7
NC_007651:3064530:315599031559903156355366Burkholderia thailandensis E264 chromosome I, complete sequencetransposase4e-0754.7
NC_020209:1949500:196784319678431968235393Pseudomonas poae RE*1-1-14, complete genomeputative transposase1e-0653.5
NC_009254:637952:644979644979645398420Burkholderia vietnamiensis G4 chromosome 3, complete sequencetransposase IS3/IS911 family protein1e-0653.5
NC_020209:4943734:496484449648444965236393Pseudomonas poae RE*1-1-14, complete genomeputative transposase1e-0653.5
NC_020209:4943734:496661549666154967007393Pseudomonas poae RE*1-1-14, complete genomeputative transposase1e-0653.5
NC_009720:5079048:508311550831155083555441Xanthobacter autotrophicus Py2, complete genometransposase IS3/IS911 family protein1e-0653.1
NC_011083:4547825:460386946038694604237369Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transposase1e-0653.1
NC_003296:673790:707962707962708330369Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeISRSO10-TRANSPOSASE ORFA PROTEIN1e-0653.1
NC_012721:1635999:164431916443191644684366Burkholderia glumae BGR1 chromosome 2, complete genomeTransposase1e-0653.1
NC_012724:2547500:257322125732212573586366Burkholderia glumae BGR1 chromosome 1, complete genomeTransposase1e-0653.1
NC_007973:2773427:278083427808342781235402Ralstonia metallidurans CH34 chromosome 1, complete sequencetransposase IS3/IS9111e-0653.1
NC_007973:2150962:216442321644232164824402Ralstonia metallidurans CH34 chromosome 1, complete sequencetransposase IS3/IS9111e-0653.1
NC_017249:8221992:8271347827134782727051359Bradyrhizobium japonicum USDA 6, complete genometransposase2e-0652.4
NC_017249:8427163:8448059844805984494171359Bradyrhizobium japonicum USDA 6, complete genometransposase2e-0652.4
NC_011004:1174813:117930011793001179749450Rhodopseudomonas palustris TIE-1, complete genometransposase IS3/IS911 family protein3e-0652.4
NC_003296:556836:578373578373578741369Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeISRSO10-TRANSPOSASE ORFA PROTEIN3e-0652.4
NC_002947:6152500:615486061548606155180321Pseudomonas putida KT2440, complete genomeISPpu14, transposase Orf13e-0652
NC_002947:4994335:503619150361915036511321Pseudomonas putida KT2440, complete genomeISPpu14, transposase Orf13e-0652
NC_010515:2691000:270497527049752705391417Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetransposase IS3/IS911 family protein3e-0652
NC_015458:3328905:334645533464553346877423Pusillimonas sp. T7-7 chromosome, complete genomeISSfl3 orfA3e-0652
NC_008463:5246954:530117353011735301439267Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative transposase3e-0652
NC_010501:30000:422444224442564321Pseudomonas putida W619, complete genometransposase IS3/IS911 family protein5e-0651.6
NC_002947:4484824:448639544863954486715321Pseudomonas putida KT2440, complete genomeISPpu14, transposase Orf15e-0651.6
NC_002947:4994335:503324350332435033563321Pseudomonas putida KT2440, complete genomeISPpu14, transposase Orf15e-0651.6
NC_014118:1528851:154024615402461540647402Burkholderia sp. CCGE1002 chromosome chromosome 2, completetransposase IS3/IS911 family protein6e-0651.2
NC_014117:132524:163887163887164288402Burkholderia sp. CCGE1002 chromosome chromosome 1, completetransposase IS3/IS911 family protein6e-0651.2
NC_017986:2548720:256416525641652564485321Pseudomonas putida ND6 chromosome, complete genomeISPpu14, transposase Orf16e-0651.2
NC_017986:4885979:490101949010194901339321Pseudomonas putida ND6 chromosome, complete genomeISPpu14, transposase Orf16e-0651.2
NC_013860:171235:192690192690193112423Azospirillum sp. B510 plasmid pAB510f, complete sequencetransposase8e-0650.4