Pre_GI Gene

Some Help

Host: NC_011745 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011745:333061 Escherichia coli ED1a chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated in the 2000s from the faeces of a healthy man in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3330613340831023putative myo-inositol 2-dehydrogenase iolG-likeQuickGO ontologyBLASTP
3341563353821227putative permeases of the major facilitator superfamily MFSQuickGO ontologyBLASTP
335519335662144hypothetical protein
335652336053402putative transposase IS3 familyQuickGO ontologyBLASTP
336050336397348putative transposase ORF2 IS66 familyQuickGO ontologyBLASTP
3364473378531407putative transposase ORF 1 IS66 familyQuickGO ontologyBLASTP
338061338222162hypothetical protein
3383153395471233putative reverse transcriptaseQuickGO ontologyBLASTP
339663339809147hypothetical proteinBLASTP
339839340378540Deoxyribose specific mutarotase partialQuickGO ontologyBLASTP
3403903417061317putative L-fucose permeaseQuickGO ontologyBLASTP
3417343427501017DeoxyribokinaseQuickGO ontologyBLASTP
342954343739786putative transcriptional regulatorQuickGO ontologyBLASTP
343916344089174hypothetical protein
34534334560626450S ribosomal protein L31 type BQuickGO ontologyBLASTP
346782347372591putative transcriptional regulatorQuickGO ontologyBLASTP
347496347771276IS1 repressor protein InsAQuickGO ontologyBLASTP
347690348193504IS1 transposase InsABQuickGO ontologyBLASTP
348223348810588common pilus ECPQuickGO ontologyBLASTP
348867349535669hypothetical proteinBLASTP
3495613520862526hypothetical proteinBLASTP
353155353931777putative reductaseQuickGO ontologyBLASTP
354091354684594hypothetical proteinBLASTP
354696354932237hypothetical proteinBLASTP
3550413563661326pyridine nucleotide-disulfide oxidoreductaseQuickGO ontologyBLASTP