Pre_GI Gene

Some Help

Host: NC_009801 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009801:2898426 Escherichia coli E24377A, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: ETEC is the leading cause of traveler's diarrhea, characterized by a large volume of watery diarrhea. ETEC primarily colonizes the small intestine by way of the pili. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
289842628996881263CBStransporter associated domain proteinQuickGO ontologyBLASTP
28998112900416606hypothetical protein
29004512901041591co-chaperone GrpEQuickGO ontologyBLASTP
29011642902042879NAD kinaseQuickGO ontologyBLASTP
290212829037891662DNA repair protein RecNQuickGO ontologyBLASTP
29039382904279342lipoprotein SmpAOmlA familyQuickGO ontologyBLASTP
29043412904631291RnfH family proteinQuickGO ontologyBLASTP
29046212905058438polyketide cyclasedehydrase family proteinQuickGO ontologyBLASTP
29052292905711483SsrA-binding proteinQuickGO ontologyBLASTP
290637429076841311phage integrase family proteinQuickGO ontologyBLASTP
290796729095231557site-specific recombinase resolvase familyQuickGO ontologyBLASTP
29095132910409897ParB family proteinQuickGO ontologyBLASTP
29104062911302897repB plasmid partitioning proteinQuickGO ontologyBLASTP
291271329142601548N4N6-methyltransferase family proteinQuickGO ontologyBLASTP
291425729153781122putative type I restriction-modification system S subunitQuickGO ontologyBLASTP
291543729186763240type I site-specific deoxyribonuclease HsdR familyQuickGO ontologyBLASTP
29193332920304972hypothetical proteinBLASTP
29207342921720987hypothetical proteinBLASTP
29220762922516441hypothetical protein
29225322923476945hypothetical proteinBLASTP
29228352923002168hypothetical protein
29236542924058405hypothetical proteinBLASTP
292406429252781215relaxasemobilization nuclease domain proteinQuickGO ontologyBLASTP
29257892926175387putative lipoproteinQuickGO ontologyBLASTP
29262022926390189putative lipoproteinQuickGO ontologyBLASTP
292646429276361173transposase IS21 familyQuickGO ontologyBLASTP
29276362928430795transposition helper protein IS21 familyQuickGO ontologyBLASTP
29287882929213426hypothetical proteinBLASTP
29302082930771564hypothetical proteinBLASTP
29321292932983855hypothetical proteinBLASTP
29337412934733993hypothetical proteinBLASTP
29338522934004153hypothetical protein
29360092936974966hypothetical proteinBLASTP
29376552937981327hypothetical proteinBLASTP
29403502940739390IS66 family element orf1QuickGO ontologyBLASTP
29407362941083348IS66 family element orf2QuickGO ontologyBLASTP
29435152943772258BLASTP
2946286294636176tRNA-MetQuickGO ontologyBLASTP
294692129487621842alpha amylase domain proteinQuickGO ontologyBLASTP