Pre_GI Gene

Some Help

Host: NC_011000 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011000:1262324 Burkholderia cenocepacia J2315 chromosome 1, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain is the index strain for transmission among CF patients in the UK. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
12623241263205882glyoxalasebleomycin resistance proteindioxygenase superfamily proteinQuickGO ontologyBLASTP
126326912645521284hypothetical proteinBLASTP
12646821265407726TetR family regulatory proteinQuickGO ontologyBLASTP
12671711267554384putative transposaseQuickGO ontologyBLASTP
12675511267889339putative transposaseQuickGO ontologyBLASTP
126795312695061554putative transposaseQuickGO ontologyBLASTP
127053612730432508hypothetical proteinBLASTP
127310412759862883hypothetical proteinBLASTP
12759961276532537hypothetical proteinBLASTP
12765451276796252hypothetical proteinBLASTP
12779661278229264transposaseQuickGO ontologyBLASTP
127869112804631773hypothetical proteinBLASTP
128079912823701572putative transposaseQuickGO ontologyBLASTP
12824221282769348putative transposaseQuickGO ontologyBLASTP
12827661283161396putative transposaseQuickGO ontologyBLASTP
12834211284362942putative fusaric acid resistance transport proteinQuickGO ontologyBLASTP
12843651284568204hypothetical proteinBLASTP
128457912867742196putative fusaric acid resistance transporter proteinQuickGO ontologyBLASTP
128684412883041461putative fusaric acid resistance outer membrane efflux proteinQuickGO ontologyBLASTP
128830112893141014LysR family regulatory proteinQuickGO ontologyBLASTP
12894891290394906LysR family regulatory proteinQuickGO ontologyBLASTP
129060812917651158putative glycerate kinaseQuickGO ontologyBLASTP
12918831292545663TetR family regulatory proteinQuickGO ontologyBLASTP
129288912942471359aldehyde dehydrogenase family proteinQuickGO ontologyBLASTP
12943401294714375BLASTP
129475512965931839putative oxidoreductaseQuickGO ontologyBLASTP
129700812981591152putative oxidoreductaseQuickGO ontologyBLASTP
129816312993261164hypothetical proteinBLASTP
12993261300171846hypothetical proteinBLASTP
13003751300725351hypothetical protein
13008221301139318putative lipoproteinQuickGO ontology
130132213033312010putative O-antigen acetylaseQuickGO ontologyBLASTP
13034561303824369putative DNA-binding proteinQuickGO ontologyBLASTP
13038211304171351hypothetical proteinBLASTP
13041731304472300hypothetical proteinBLASTP
13045751305381807hypothetical proteinBLASTP
130544813065391092hypothetical proteinBLASTP
13065361307450915hypothetical proteinBLASTP
13075011307716216hypothetical proteinBLASTP
13077281308723996putative phage-related proteinQuickGO ontologyBLASTP
13087941308994201hypothetical protein
13089911309959969hypothetical proteinBLASTP