Pre_GI: BLASTP Hits

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Query: NC_009708:915814:924763 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 924763, End: 925350, Length: 588

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009438:236424:2372692372692383001032Shewanella putrefaciens CN-32 chromosome, complete genomeIS630 orf1e-88325
NC_012214:537000:5410455410455420851041Erwinia pyrifoliae Ep1/96, complete genometransposase5e-86316
NC_012214:745302:7522477522477532871041Erwinia pyrifoliae Ep1/96, complete genometransposase5e-86316
NC_007384:2007467:2014725201472520157561032Shigella sonnei Ss046, complete genomeIS630 ORF5e-85313
NC_007384:1737885:1748054174805417490851032Shigella sonnei Ss046, complete genomeIS630 ORF5e-85313
NC_007384:307013:3185883185883196191032Shigella sonnei Ss046, complete genomeIS630 ORF5e-85313
NC_007384:3383983:3383983338398333850141032Shigella sonnei Ss046, complete genomeIS630 ORF5e-85313
NC_016822:1818897:1827376182737618284071032Shigella sonnei 53G, complete genomeIS630 orf5e-85313
NC_016822:3282654:3298701329870132997321032Shigella sonnei 53G, complete genomeIS630 orf5e-85313
NC_007385:157516:1607221607221617531032Shigella sonnei Ss046 plasmid pSS_046, complete sequenceIS630 ORF3e-84310
NC_016822:3485631:3497894349789434989251032Shigella sonnei 53G, complete genomeIS630 orf4e-84310
NC_012779:2424967:243549724354972436486990Edwardsiella ictaluri 93-146, complete genomehypothetical protein4e-77287
AP010958:3627355:364082536408253641670846Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-69261
AP010958:5090696:510537051053705106215846Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-69261
NC_002655:3919545:393301739330173933862846Escherichia coli O157:H7 EDL933, complete genomeputative transposase2e-69261
NC_011353:3956630:397010139701013970946846Escherichia coli O157:H7 str. EC4115 chromosome, complete genome2e-69261
NC_013008:3911356:392482739248273925672846Escherichia coli O157:H7 str. TW14359 chromosome, complete genometransposase2e-69261
NC_013353:3627355:364082536408253641670846Escherichia coli O103:H2 str. 12009, complete genome2e-69261
NC_013353:5090696:510537051053705106215846Escherichia coli O103:H2 str. 12009, complete genome2e-69261
NC_013364:5083949:509798450979845098829846Escherichia coli O111:H- str. 11128, complete genome2e-68258
NC_017319:192482:195688195688196644957Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceIS630 ORF1e-67255
NC_004851:191709:195760195760196716957Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceIS630 ORF1e-67255
NC_002695:3852233:386576138657613866549789Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein5e-61233
NC_013421:2613137:262804226280422628872831Pectobacterium wasabiae WPP163, complete genome9e-61232
NC_003277:22257:3292932929339661038Salmonella typhimurium LT2 plasmid pSLT, complete sequenceputative integrase protein2e-59228
NC_016861:22256:3292232922339591038Salmonella enterica subsp. enterica serovar Typhimurium strputative integrase2e-59228
NC_010102:4745949:474832947483294748829501Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-59227
NC_011205:4718239:472403647240364724536501Salmonella enterica subsp. enterica serovar Dublin str. CT_020218531e-58225
NC_016831:4517850:452384745238474524347501Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-58223
NC_011751:2327014:234246623424662342945480Escherichia coli UMN026 chromosome, complete genomeputative transposase3e-56218
NC_009348:2247500:2274776227477622758071032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase1e-55216
NC_005126:5188976:5188976518897651899891014Photorhabdus luminescens subsp. laumondii TTO1, complete genomeTransposase, IS630 family6e-56216
NC_009348:1968826:1977019197701919780501032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase1e-55215
NC_009348:2631759:2642233264223326432641032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase1e-55215
NC_009348:2034500:2045224204522420462551032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase1e-55215
NC_009348:3261500:3270842327084232718731032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase1e-55215
NC_009348:3261500:3268688326868832697191032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase1e-55215
NC_009348:4135002:4157632415763241586631032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase1e-55215
NC_009348:2362163:2381760238176023827911032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase1e-55215
NC_009348:1475955:1480996148099614820271032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase1e-55215
NC_009348:161244:1691281691281701591032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase1e-55215
NC_009348:1347500:1354117135411713551481032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase3e-55214
NC_009350:6987:96149614106451032Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completeIS630 family transposase3e-55214
NC_012779:2424967:244799224479922448372381Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-54212
NC_012214:1355500:137432213743221374669348Erwinia pyrifoliae Ep1/96, complete genometransposase, fragment9e-54209
NC_009348:3819271:3831763383176338327941032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-52203
NC_009348:1663870:1679917167991716809481032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-52203
NC_016745:1719800:1728949172894917299801032Oceanimonas sp. GK1 chromosome, complete genomeIS630 family transposase2e-48191
NC_016745:2280375:2291970229197022930011032Oceanimonas sp. GK1 chromosome, complete genomeIS630 family transposase2e-48191
NC_012691:2050957:2054975205497520559941020Tolumonas auensis DSM 9187, complete genometransposase, putative2e-46185
NC_012691:1144715:1153221115322111542401020Tolumonas auensis DSM 9187, complete genometransposase, putative2e-46185
NC_009786:43331:592285922860046819Escherichia coli E24377A plasmid pETEC_80, complete sequence2e-45182
NC_012779:2856051:286125928612592862020762Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-40165
CU928145:3360967:338933233893323389640309Escherichia coli 55989 chromosome, complete genomeputative transposase (fragment), IS630 family2e-39162
NC_011748:3360967:338933233893323389640309Escherichia coli 55989, complete genomeputative transposase (fragment), IS630 family2e-39162
NC_013364:3701895:371481737148173715104288Escherichia coli O111:H- str. 11128, complete genome1e-38159
NC_012779:2424967:243338924333892433670282Edwardsiella ictaluri 93-146, complete genomehypothetical protein7e-38156
CU928159:30700:446594465944865207Escherichia coli str. 55989 plasmid 55989p, complete genomeputative transposase (fragment), IS630 family6e-28123
NC_011149:3863913:387677838767783877026249Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-26119
NC_013364:3701895:371511737151173715728612Escherichia coli O111:H- str. 11128, complete genome2e-26118
NC_004459:1:562156215965345Vibrio vulnificus CMCP6 chromosome I, complete sequenceTransposase7e-24110
NC_016816:2684336:270954227095422710033492Pantoea ananatis LMG 5342, complete genomeIS630 family transposase2e-22105
NC_010067:2304313:231092823109282311278351Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-22103
NC_008150:844727:889085889085889405321Yersinia pestis Antiqua, complete genomeputative transposase2e-2099
NC_004088:2966331:297209429720942972414321Yersinia pestis KIM, complete genometransposase2e-2099
NC_008149:2802392:280815528081552808475321Yersinia pestis Nepal516, complete genometransposase2e-2099
NC_005810:1467772:150412615041261504446321Yersinia pestis biovar Microtus str. 91001, complete genomeputative transposase2e-2099
NC_009381:1682000:168942416894241689744321Yersinia pestis Pestoides F chromosome, complete genometransposase2e-2099
NC_017168:3977767:398353039835303983850321Yersinia pestis A1122 chromosome, complete genometransposase2e-2099
NC_017265:2586729:259249225924922592812321Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,transposase2e-2099
NC_008253:3941938:398899739889973989359363Escherichia coli 536, complete genomehypothetical protein6e-1890.5
NC_008149:2802392:280787328078732808046174Yersinia pestis Nepal516, complete genomeIS630 ORF2e-1789.4
NC_008150:844727:889514889514889687174Yersinia pestis Antiqua, complete genomeIS630 ORF2e-1789.4
NC_009381:1682000:168914216891421689315174Yersinia pestis Pestoides F chromosome, complete genomeIS630 orf2e-1789.4
NC_017265:2586729:259221025922102592383174Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,transposase2e-1789.4
NC_019892:429975:4391354391354401781044Singulisphaera acidiphila DSM 18658 chromosome, complete genometransposase2e-1685.5
NC_019892:2684793:2697235269723526982781044Singulisphaera acidiphila DSM 18658 chromosome, complete genometransposase2e-1685.5
NC_019892:2684793:2706311270631127073541044Singulisphaera acidiphila DSM 18658 chromosome, complete genometransposase2e-1685.5
NC_004459:3243987:326663032666303267007378Vibrio vulnificus CMCP6 chromosome I, complete sequenceTransposase Tpase1e-1582.8
NC_010660:175200:178851178851179033183Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence3e-1581.3
NC_013364:1997891:200453720045372004701165Escherichia coli O111:H- str. 11128, complete genome3e-1478.2
NC_011353:1716037:173496917349691735133165Escherichia coli O157:H7 str. EC4115 chromosome, complete genome3e-1478.2
NC_002655:2264773:227363522736352273799165Escherichia coli O157:H7 EDL933, complete genomeputative transposase (partial)3e-1478.2
NC_013008:1715831:173394717339471734108162Escherichia coli O157:H7 str. TW14359 chromosome, complete genome2e-1375.9
NC_007608:97092:100298100298100906609Shigella boydii Sb227 plasmid pSB4_227, complete sequenceIS630 ORF3e-1375.1
NC_004459:3243987:325986532598653260188324Vibrio vulnificus CMCP6 chromosome I, complete sequenceTransposase2e-1272
NC_013956:3181421:318898531889853189218234Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein4e-1271.2
NC_013892:202778:218348218348218566219Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein7e-1167
NC_002655:2264773:227403322740332274284252Escherichia coli O157:H7 EDL933, complete genomeputative transposase (partial)3e-1065.1
CU928159:30700:448714487145050180Escherichia coli str. 55989 plasmid 55989p, complete genomeputative transposase (fragment), IS630 family8e-1063.5
NC_013941:3676146:368999936899993690463465Escherichia coli O55:H7 str. CB9615 chromosome, complete genometransposase7e-0960.5
NC_014228:3353896:337299833729983373114117Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein3e-0858.5
NC_015711:6149615:616840361684036168939537Myxococcus fulvus HW-1 chromosome, complete genometransposase4e-0858.2
NC_011567:139598:160177160177160737561Anoxybacillus flavithermus WK1, complete genomeTransposase7e-0753.9
NC_008095:6143738:6152404615240461535011098Myxococcus xanthus DK 1622, complete genometransposase, IS630 family8e-0753.5
NC_004347:4441110:445477544547754455032258Shewanella oneidensis MR-1, complete genomehypothetical protein3e-0652