Pre_GI Gene

Some Help

Host: NC_011149 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011149:3863913 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
386391338662312319alpha-xylosidaseQuickGO ontologyBLASTP
386624338676251383sodiumgalactoside family symporterQuickGO ontologyBLASTP
3867913386800795tRNA-SecQuickGO ontologyBLASTP
38689533869075123hypothetical protein
386919638704251230putative fimbrial proteinQuickGO ontologyBLASTP
38704493871042594fimbrial proteinQuickGO ontologyBLASTP
38710583871666609hypothetical proteinBLASTP
38716813872265585fimbrial proteinQuickGO ontologyBLASTP
387227938748792601outer membrane usher protein HtrEQuickGO ontologyBLASTP
38749003875643744pilin chaperone ecpD1QuickGO ontologyBLASTP
38757873876413627pilin chaperone ecpD2QuickGO ontologyBLASTP
38776973877828132hypothetical proteinBLASTP
38785643879181618RmbAQuickGO ontologyBLASTP
387925638821232868outer membrane autotransporter barrel domainQuickGO ontologyBLASTP
38822173882681465o94QuickGO ontologyBLASTP
38826923883456765transcriptional regulatory protein CQuickGO ontologyBLASTP
38841533884278126hypothetical proteinBLASTP
38843333885013681SlsAQuickGO ontologyBLASTP