Pre_GI Gene

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Host: NC_010102 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010102:4745949 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
47459494746479531hypothetical proteinBLASTP
474650747475261020hypothetical proteinBLASTP
47476344747840207hypothetical proteinBLASTP
4747749474783082tRNA-LeuQuickGO ontologyBLASTP
47483294748829501hypothetical proteinBLASTP
47489064749154249hypothetical proteinBLASTP
47492674749506240hypothetical proteinBLASTP
47495094749817309hypothetical proteinBLASTP
47503244750704381hypothetical proteinBLASTP
475088347543983516hypothetical proteinBLASTP
475469147561151425hypothetical proteinBLASTP
475615847573661209hypothetical proteinBLASTP
47574904757723234hypothetical proteinBLASTP
47582284758944717hypothetical proteinBLASTP
475950447611291626hypothetical proteinBLASTP
47610324761319288hypothetical protein
47611404761397258hypothetical proteinBLASTP
47616404761831192hypothetical proteinBLASTP
47618854762493609hypothetical proteinBLASTP
47627234763718996hypothetical proteinBLASTP
47639944764905912hypothetical proteinBLASTP
47649584765083126hypothetical protein
47650824765210129hypothetical proteinBLASTP
47652034765571369hypothetical proteinBLASTP
47655684766095528hypothetical proteinBLASTP
47661024766341240hypothetical protein
47663454766557213hypothetical protein
47666404767365726hypothetical proteinBLASTP
476736647683791014hypothetical proteinBLASTP