Pre_GI Gene

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Host: NC_004347 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004347:4441110 Shewanella oneidensis MR-1, complete genome

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
443962644411131488type I restriction-modification system S subunitQuickGO ontologyBLASTP
444111044427231614type I restriction-modification system M subunitQuickGO ontologyBLASTP
444285144439691119hypothetical proteinBLASTP
444427444478403567type I restriction-modification system R subunitQuickGO ontologyBLASTP
44479664448232267ISSod2 transposase OrfAQuickGO ontologyBLASTP
44482264449041816ISSod2 transposase OrfBQuickGO ontologyBLASTP
44492204450101882hypothetical proteinBLASTP
44504194450853435hypothetical prophage Sf6-like integraseQuickGO ontologyBLASTP
4451215445128672hypothetical prophage Sf6-like integraseQuickGO ontology
445148944524931005hypothetical transposaseQuickGO ontologyBLASTP
44527634453035273hypothetical protein
44532084454011804undecaprenyl pyrophosphate phosphataseQuickGO ontologyBLASTP
44541754454423249hypothetical protein
44547754455032258hypothetical proteinBLASTP
44559794456788810ISSod1 transposase OrfBQuickGO ontologyBLASTP
44568484457138291ISSod1 transposase OrfAQuickGO ontologyBLASTP
44573924458369978hypothetical proteinBLASTP
44589694459724756hypothetical proteinBLASTP
44605814461225645potassium uptake protein KtrA putativeQuickGO ontologyBLASTP
446122944625931365potassium uptake protein KtrBQuickGO ontologyBLASTP
446259944636571059apbE family proteinQuickGO ontologyBLASTP
446386444650691206ISSod5 transposaseQuickGO ontologyBLASTP