Pre_GI: BLASTP Hits

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Query: NC_009512:5920960:5948033 Pseudomonas putida F1, complete genome

Start: 5948033, End: 5948569, Length: 537

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:2687588:271694727169472717483537Pseudomonas putida ND6 chromosome, complete genomeF0F1 ATP synthase subunit delta4e-98356
NC_010322:6037566:606738360673836067919537Pseudomonas putida GB-1 chromosome, complete genomeF0F1 ATP synthase subunit delta4e-98356
NC_002947:6152500:617908961790896179625537Pseudomonas putida KT2440, complete genomeATP synthase subunit D4e-98356
NC_015733:5955467:598201659820165982552537Pseudomonas putida S16 chromosome, complete genomeF0F1 ATP synthase subunit delta1e-97355
NC_010501:5735656:576253457625345763070537Pseudomonas putida W619, complete genomeATP synthase F1, delta subunit8e-97352
NC_007005:6056765:608146660814666082002537Pseudomonas syringae pv. syringae B728a, complete genomeATP synthase subunit D1e-91335
NC_007492:6372900:642677264267726427308537Pseudomonas fluorescens PfO-1, complete genomeH+-transporting two-sector ATPase, delta (OSCP) subunit5e-91332
NC_004337:3590323:392713839271383927671534Shigella flexneri 2a str. 301, complete genomeATP synthase subunit D2e-35148
NC_015222:386000:393196393196393732537Nitrosomonas sp. AL212 chromosome, complete genomeATP synthase F1, delta subunit2e-33142
NC_016632:1:160616062139534Serratia symbiotica str. 'Cinara cedri' chromosome, completeATP synthase d chain4e-32137
NC_015572:4916430:494748249474824948012531Methylomonas methanica MC09 chromosome, complete genomeATP synthase subunit delta1e-31135
NC_004757:230541:237564237564238100537Nitrosomonas europaea ATCC 19718, complete genomeATP synthase, delta (OSCP) subunit4e-31134
NC_005966:159232:180771180771181307537Acinetobacter sp. ADP1, complete genomemembrane-bound ATP synthase , F1 sector, delta-subunit9e-31132
NC_007292:1:424842484793546Candidatus Blochmannia pennsylvanicus str. BPEN, complete genomeATP synthase, F1 sector, delta-subunit7e-24110
NC_008601:1733940:176401417640141764538525Francisella tularensis subsp. novicida U112, complete genomeATP synthase, F1 sector, subunit delta2e-23108
NC_008369:1702885:173214517321451732669525Francisella tularensis subsp. holarctica OSU18, complete genomeH(+)-transporting two-sector ATPase2e-23108
NC_009749:1699152:172841217284121728936525Francisella tularensis subsp. holarctica FTA, complete genomeATP synthase F1, delta subunit2e-23108
NC_007880:1703346:173251517325151733039525Francisella tularensis subsp. holarctica, complete genomeATP synthase delta chain2e-23108
NC_008245:24652:618106181062334525Francisella tularensis subsp. tularensis FSC 198, complete genomeATP synthase delta chain2e-23108
NC_006570:24636:617946179462318525Francisella tularensis subsp. tularensis Schu 4, complete genomeATP synthase delta chain2e-23108
NC_009257:109528:146695146695147219525Francisella tularensis subsp. tularensis WY96-3418 chromosome,F0F1 ATP synthase subunit delta2e-23108
NC_016933:24654:618126181262336525Francisella tularensis TIGB03 chromosome, complete genomeATP synthase subunit delta2e-23108
NC_016937:24654:618126181262336525Francisella tularensis subsp. tularensis TI0902 chromosome,ATP synthase subunit delta2e-23108
NC_010677:96470:133643133643134167525Francisella tularensis subsp. mediasiatica FSC147, complete genomeATP synthase, F1 sector, subunit delta2e-23108
NC_010336:996661:103388410338841034408525Francisella philomiragia subsp. philomiragia ATCC 25017, completeATP synthase, F1 sector, subunit delta8e-22103
NC_015696:517941:555335555335555859525Francisella sp. TX077308 chromosome, complete genomeATP synthase subunit delta2e-21102
NC_010513:542312:543909543909544436528Xylella fastidiosa M12 chromosome, complete genomeF0F1 ATP synthase subunit delta9e-2096.3
NC_004344:1:381738174347531Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein2e-1995.1
NC_010577:530917:532514532514533041528Xylella fastidiosa M23, complete genomeATP synthase F1, delta subunit3e-1994.4
NC_004556:531000:532661532661533188528Xylella fastidiosa Temecula1, complete genomeATP synthase subunit D3e-1994.4
NC_002488:1099975:110533511053351105862528Xylella fastidiosa 9a5c, complete genomeATP synthase subunit D4e-1994
NC_012489:2913920:291540929154092915966558Gemmatimonas aurantiaca T-27, complete genomeATP synthase subunit delta6e-1787
NC_008262:2379144:239268223926822393221540Clostridium perfringens SM101, complete genomeATP synthase F1, delta subunit2e-1375.1
NC_008261:2708929:272613227261322726671540Clostridium perfringens ATCC 13124, complete genomeATP synthase F1, delta subunit4e-1374.3
NC_003366:2494907:251211725121172512656540Clostridium perfringens str. 13, complete genomeATP synthase subunit D4e-1374.3
NC_011726:2793669:280755828075582808115558Cyanothece sp. PCC 8801, complete genomeATP synthase F1, delta subunit6e-1373.6
NC_013161:3448966:345334234533423453899558Cyanothece sp. PCC 8802, complete genomeATP synthase F1, delta subunit6e-1373.6
NC_007759:623116:630085630085630630546Syntrophus aciditrophicus SB, complete genomeATP synthase delta chain8e-1373.2
NC_019815:679592:685289685289685828540Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiATP synthase delta chain1e-1272.4
NC_009495:183767:187316187316187855540Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeATP synthase F0F1 subunit delta2e-1271.6
NC_009922:2766397:276639727663972766939543Alkaliphilus oremlandii OhILAs, complete genomeATP synthase F1, delta subunit2e-1271.6
NC_008009:5139896:514397251439725144511540Acidobacteria bacterium Ellin345, complete genomeATP synthase F1, delta subunit5e-1270.5
NC_014654:454633:459226459226459786561Halanaerobium sp. 'sapolanicus' chromosome, complete genomeATP synthase F1, delta subunit7e-1270.1
NC_014171:5107956:513233151323315132873543Bacillus thuringiensis BMB171 chromosome, complete genomeF0F1 ATP synthase subunit delta8e-1269.7
NC_011969:4993386:501998250199825020524543Bacillus cereus Q1 chromosome, complete genomeF0F1 ATP synthase subunit delta8e-1269.7
NC_011725:5201995:522845252284525228994543Bacillus cereus B4264 chromosome, complete genomeATP synthase F0F1 subunit delta8e-1269.7
NC_004722:5194000:522047452204745221016543Bacillus cereus ATCC 14579, complete genomeATP synthase subunit D8e-1269.7
NC_003909:4996783:502074150207415021283543Bacillus cereus ATCC 10987, complete genomeATP synthase subunit D8e-1269.7
NC_011772:5158680:518241551824155182957543Bacillus cereus G9842, complete genomeATP synthase F1, delta subunit1e-1169.3
NC_021182:4427468:444773144477314448270540Clostridium pasteurianum BC1, complete genomeATP synthase, F1 delta subunit2e-1168.9
NC_009617:489971:502873502873503412540Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeF0F1 ATP synthase subunit delta2e-1168.9
NC_014932:1387818:140519514051951405779585Bartonella clarridgeiae 73, complete genomeATP synthase F1, delta subunit3e-1168.2
NC_010723:485874:489762489762490301540Clostridium botulinum E3 str. Alaska E43, complete genomeATP synthase F1, delta subunit3e-1168.2
NC_017200:5149528:515990851599085160450543Bacillus thuringiensis serovar finitimus YBT-020 chromosome,F0F1 ATP synthase subunit delta7e-1166.6
NC_009633:365325:386818386818387360543Alkaliphilus metalliredigens QYMF chromosome, complete genomeATP synthase F1 subunit delta1e-1066.2
NC_018645:2301705:230272623027262303277552Desulfobacula toluolica Tol2, complete genomeF0F1 ATP synthase subunit delta AtpH1e-1066.2
NC_019903:3537545:354000235400023540538537Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,ATP synthase F1 subcomplex subunit delta1e-1065.9
NC_009883:1429000:144278814427881443357570Rickettsia bellii OSU 85-389, complete genomeF0F1 ATP synthase subunit delta1e-1065.9
NC_007940:97949:104813104813105382570Rickettsia bellii RML369-C, complete genomeATP synthase delta chain1e-1065.9
NC_020291:684500:688345688345688884540Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeATP synthase subunit delta2e-1065.5
NC_010001:4586000:459330845933084593856549Clostridium phytofermentans ISDg, complete genomeATP synthase F1, delta subunit2e-1065.5
NC_008600:5046000:507089650708965071438543Bacillus thuringiensis str. Al Hakam, complete genomeATP synthase F1, delta subunit2e-1065.1
NC_003997:5032969:504205150420515042593543Bacillus anthracis str. Ames, complete genomeATP synthase subunit D2e-1065.1
NC_005957:5037499:504687550468755047417543Bacillus thuringiensis serovar konkukian str. 97-27, completeATP synthase subunit D2e-1065.1
NC_007530:5033095:504217750421775042719543Bacillus anthracis str. 'Ames Ancestor', complete genomeATP synthase subunit D2e-1065.1
NC_011773:5091609:510185951018595102401543Bacillus cereus AH820 chromosome, complete genomeF0F1 ATP synthase subunit delta2e-1065.1
NC_012659:5031827:504207750420775042619543Bacillus anthracis str. A0248, complete genomeF0F1 ATP synthase subunit delta2e-1065.1
NC_016779:5009320:503554050355405036082543Bacillus cereus F837/76 chromosome, complete genomeATP synthase subunit delta2e-1065.1
NC_008783:119758:125149125149125733585Bartonella bacilliformis KC583, complete genomeATP synthase F1, delta subunit4e-1064.3
NC_007354:77108:127933127933128484552Ehrlichia canis str. Jake, complete genomeH+-transporting two-sector ATPase, delta(OSCP) subunit6e-1063.5
NC_016641:1006662:101083310108331011378546Paenibacillus terrae HPL-003 chromosome, complete genomeATP synthase subunit delta1e-0962.8
NC_013093:7174636:719152771915277192354828Actinosynnema mirum DSM 43827, complete genomeATP synthase F1, delta subunit4e-0960.8
NC_019970:813917:822761822761823294534Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeATP synthase, F1 delta subunit3e-0858.2
NC_000963:995500:101098510109851011536552Rickettsia prowazekii str. Madrid E, complete genomeATP synthase subunit D3e-0858.2
NC_017048:225980:241409241409241960552Rickettsia prowazekii str. GvV257 chromosome, complete genomeF0F1 ATP synthase subunit delta3e-0858.2
NC_017049:993863:100925510092551009806552Rickettsia prowazekii str. Chernikova chromosome, complete genomeF0F1 ATP synthase subunit delta3e-0858.2
NC_017050:995500:101090410109041011455552Rickettsia prowazekii str. Katsinyian chromosome, complete genomeF0F1 ATP synthase subunit delta3e-0858.2
NC_017051:993000:100849810084981009049552Rickettsia prowazekii str. Dachau chromosome, complete genomeF0F1 ATP synthase subunit delta3e-0858.2
NC_017056:995500:101089610108961011447552Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomeF0F1 ATP synthase subunit delta3e-0858.2
NC_017057:996000:101156810115681012119552Rickettsia prowazekii str. RpGvF24 chromosome, complete genomeF0F1 ATP synthase subunit delta3e-0858.2
NC_006677:1431500:143249514324951433157663Gluconobacter oxydans 621H, complete genomeATP synthase delta chain3e-0857.8
NC_018664:201487:206540206540206902363Clostridium acidurici 9a chromosome, complete genomeF-ATPase, F1 complex, subunit delta AtpH4e-0857.8
NC_014377:2033781:203537320353732035903531Thermosediminibacter oceani DSM 16646 chromosome, complete genomeATP synthase F1, delta subunit5e-0857.4
NC_008528:610070:625272625272625823552Oenococcus oeni PSU-1, complete genomeF0F1-type ATP synthase, delta subunit5e-0857.4
NC_016929:1025848:104054910405491041103555Rickettsia canadensis str. CA410 chromosome, complete genomeF0F1 ATP synthase subunit delta4e-0857.4
NC_007795:2163706:217172421717242172263540Staphylococcus aureus subsp. aureus NCTC 8325, complete genomeATP synthase F1, delta subunit7e-0856.6
NC_007793:2217872:222480222248022225341540Staphylococcus aureus subsp. aureus USA300, complete genomeATP synthase F1, delta subunit7e-0856.6
NC_010079:2217767:222519622251962225735540Staphylococcus aureus subsp. aureus USA300_TCH1516, completeF-ATPase superfamily proton (H+)- or sodium (Na+)-translocating F-type ATPase delta subunit7e-0856.6
NC_002951:2153571:216100021610002161539540Staphylococcus aureus subsp. aureus COL, complete genomeATP synthase F1, delta subunit7e-0856.6
NC_009641:2221891:222938322293832229922540Staphylococcus aureus subsp. aureus str. Newman chromosome,F0F1 ATP synthase subunit delta7e-0856.6
NC_016912:2035589:204301820430182043557540Staphylococcus aureus subsp. aureus VC40 chromosome, completeF0F1 ATP synthase subunit delta7e-0856.6
NC_017341:2247696:225512522551252255664540Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,ATP synthase subunit delta7e-0856.6
NC_009879:1035446:104991410499141050558645Rickettsia canadensis str. McKiel, complete genomeF0F1 ATP synthase subunit delta7e-0856.6
NC_012846:2154000:216745621674562168040585Bartonella grahamii as4aup, complete genomeATP synthase delta chain1e-0756.2
NC_013715:1445959:145152814515281452340813Rothia mucilaginosa DY-18, complete genomeF0F1-type ATP synthase, delta subunit1e-0756.2
NC_016050:1149000:116249411624941163048555Rickettsia japonica YH, complete genomeATP synthase subunit D1e-0756.2
NC_008554:3177723:319962931996293200180552Syntrophobacter fumaroxidans MPOB, complete genomeATP synthase F1, delta subunit1e-0756.2
NC_015866:1144958:115996111599611160515555Rickettsia heilongjiangensis 054 chromosome, complete genomeF0F1 ATP synthase subunit delta1e-0755.8
NC_007109:1335037:134971113497111350265555Rickettsia felis URRWXCal2, complete genomeATP synthase subunit D1e-0755.8
NC_012108:3965433:398311539831153983666552Desulfobacterium autotrophicum HRM2, complete genomeAtpH2e-0755.5
NC_015318:981989:986818986818987357540Hippea maritima DSM 10411 chromosome, complete genomeATP synthase subunit delta2e-0755.5
NC_017043:589500:599728599728600282555Rickettsia montanensis str. OSU 85-930 chromosome, complete genomeF0F1 ATP synthase subunit delta2e-0755.1
NC_015722:1050023:105987810598781060426549Candidatus Midichloria mitochondrii IricVA chromosome, completeATP synthase F1 subunit delta2e-0755.1
NC_009782:2230000:223753022375302238069540Staphylococcus aureus subsp. aureus Mu3, complete genomeATP synthase delta chain2e-0755.1
NC_002758:2227874:223589222358922236431540Staphylococcus aureus subsp. aureus Mu50, complete genomeATP synthase delta chain2e-0755.1
NC_002953:2157781:216520921652092165748540Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative ATP synthase delta chain2e-0755.1
NC_002745:2152000:215946021594602159999540Staphylococcus aureus subsp. aureus N315, complete genomeATP synthase delta chain2e-0755.1
NC_003923:2178000:218610421861042186643540Staphylococcus aureus subsp. aureus MW2, complete genomeATP synthase delta chain2e-0755.1
NC_009487:2257889:226590722659072266446540Staphylococcus aureus subsp. aureus JH9 chromosome, completeF0F1 ATP synthase subunit delta2e-0755.1
NC_009632:2257764:226578222657822266321540Staphylococcus aureus subsp. aureus JH1 chromosome, completeF0F1 ATP synthase subunit delta2e-0755.1
NC_016928:2121919:212922121292212129760540Staphylococcus aureus subsp. aureus M013 chromosome, completeATP synthase subunit delta2e-0755.1
NC_017351:2199644:220769322076932208232540Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeATP synthase F1 subunit delta2e-0755.1
NC_017337:2186449:219589521958952196434540Staphylococcus aureus subsp. aureus ED133 chromosome, completeATP synthase subunit delta3e-0754.7
NC_010263:1135932:114722711472271147781555Rickettsia rickettsii str. Iowa, complete genomeATP synthase delta chain4e-0754.3
NC_009882:1123709:113567011356701136224555Rickettsia rickettsii str. 'Sheila Smith', complete genomeF0F1 ATP synthase subunit delta4e-0754.3
NC_016908:1136082:114737511473751147929555Rickettsia rickettsii str. Colombia chromosome, complete genomeF0F1 ATP synthase subunit delta4e-0754.3
NC_016909:1136210:114750511475051148059555Rickettsia rickettsii str. Arizona chromosome, complete genomeF0F1 ATP synthase subunit delta4e-0754.3
NC_016911:1136584:114787911478791148433555Rickettsia rickettsii str. Hauke chromosome, complete genomeF0F1 ATP synthase subunit delta4e-0754.3
NC_016913:24000:325323253233086555Rickettsia rickettsii str. Brazil chromosome, complete genomeF0F1 ATP synthase subunit delta4e-0754.3
NC_016914:1136700:114799511479951148549555Rickettsia rickettsii str. Hino chromosome, complete genomeF0F1 ATP synthase subunit delta4e-0754.3
NC_011296:229494:239589239589240134546Thermodesulfovibrio yellowstonii DSM 11347, complete genomeATP synthase F1, delta subunit4e-0754.3
NC_007622:2117188:212360621236062124145540Staphylococcus aureus RF122, complete genomeATP synthase delta chain4e-0754.3
NC_016930:1154500:116649811664981167052555Rickettsia philipii str. 364D chromosome, complete genomeF0F1 ATP synthase subunit delta5e-0753.9
NC_009900:1220082:123325612332561233819564Rickettsia massiliae MTU5, complete genomeATP synthase delta chain7e-0753.5
NC_009881:1099479:111544611154461116000555Rickettsia akari str. Hartford, complete genomeF0F1 ATP synthase subunit delta7e-0753.5
NC_016639:1141924:115388511538851154439555Rickettsia slovaca 13-B chromosome, complete genomeATP synthase subunit delta7e-0753.5
NC_017065:1144500:115472311547231155277555Rickettsia slovaca str. D-CWPP chromosome, complete genomeF0F1 ATP synthase subunit delta7e-0753.5
NC_006142:994753:101046710104671011018552Rickettsia typhi str. Wilmington, complete genomeATP synthase subunit D1e-0653.1
NC_017062:996197:101191110119111012462552Rickettsia typhi str. B9991CWPP chromosome, complete genomeF0F1 ATP synthase subunit delta1e-0653.1
NC_017066:995629:101134310113431011894552Rickettsia typhi str. TH1527 chromosome, complete genomeF0F1 ATP synthase subunit delta1e-0653.1
NC_017028:1348865:136201613620161362570555Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeF0F1 ATP synthase subunit delta9e-0753.1
NC_017080:191906:215561215561216166606Phycisphaera mikurensis NBRC 102666, complete genomeATP synthase subunit delta8e-0753.1
NC_008319:2007752:202879020287902029338549Synechococcus sp. CC9311, complete genomeATP synthase F1, delta subunit8e-0753.1
NC_017058:283738:296695296695297249555Rickettsia australis str. Cutlack chromosome, complete genomeF0F1 ATP synthase subunit delta1e-0652.8
NC_018604:2053585:208146920814692082005537Brachyspira pilosicoli WesB complete genomeF0F1-type ATP synthase subunit delta1e-0652.8
NC_019908:21970:294162941629952537Brachyspira pilosicoli P43/6/78 chromosome, complete genomeF0F1 ATP synthase subunit delta1e-0652.4
NC_018607:805966:810118810118810654537Brachyspira pilosicoli B2904 chromosome, complete genomeF0F1 ATP synthase subunit delta1e-0652.4
NC_014210:397922:409365409365410189825Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,ATP synthase F1, delta subunit3e-0651.2
NC_012633:1145500:115574811557481156302555Rickettsia africae ESF-5, complete genomeATP synthase delta chain3e-0651.2
NC_002952:2256000:226381922638192264358540Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative ATP synthase delta chain4e-0651.2
NC_017342:1147517:115690911569091157448540Staphylococcus aureus subsp. aureus TCH60 chromosome, completeATP synthase F1 sector delta subunit4e-0651.2
NC_007498:3655304:365530436553043655843540Pelobacter carbinolicus DSM 2380, complete genomeATP synthase F1, delta subunit5e-0650.8
NC_018750:5399316:540595154059515406766816Streptomyces venezuelae ATCC 10712, complete genomeATP synthase delta chain4e-0650.8
NC_010161:2381195:239710823971082397692585Bartonella tribocorum CIP 105476, complete genomeATP synthase delta chain5e-0650.4
NC_003103:1133806:114573311457331146287555Rickettsia conorii str. Malish 7, complete genomeATP synthase subunit D7e-0650.1
NC_004193:3078730:308929230892923089837546Oceanobacillus iheyensis HTE831, complete genomeATP synthase subunit D1e-0549.7