Pre_GI Gene

Some Help

Host: NC_017200 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017200:5149528 Bacillus thuringiensis serovar finitimus YBT-020 chromosome,

Host Lineage: Bacillus thuringiensis; Bacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: This organism, also known as BT, is famous for the production of an insecticidal toxin. The bacterium was initially discovered as a pathogen of various insects and was first used as an insecticidal agent in the early part of this century. This organism, like many other Bacilli, is found in the soil, where it leads a saprophytic existence, but becomes an opportunistic pathogen of insects when ingested. The specific activity of the toxin towards insects and its lack of toxicity to animals has made this organism a useful biocontrol agent. The delta-endotoxin, which is produced during the sporulation part of the life cycle, causes midgut paralysis and disruption of feeding by the infected insect host. The delta-endotoxin, which is produced during the sporulation part of the life cycle, causes midgut paralysis and disruption of feeding by the infected insect host. The delta-endotoxin, which is produced during the sporulation part of the life cycle, causes midgut paralysis and disruption of feeding by the infected insect host. The presence of a parasporal crystal, which is outside the exosporium of the endospore, is indicative of production of the toxin, and serves as a marker for this species.Activation of the toxin typically requires a high pH environment such as the alkaline environments in insect midguts followed by proteolysis.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
514816451495311368NADH dehydrogenase subunit CQuickGO ontologyBLASTP
51495285150046519NADH dehydrogenase subunit BQuickGO ontologyBLASTP
51500375150405369NADH dehydrogenase subunit AQuickGO ontologyBLASTP
515067451534032730sensory boxGGDEF family proteinQuickGO ontologyBLASTP
51534545154107654hypothetical proteinBLASTP
51541575154951795hypothetical proteinBLASTP
51550835155484402F0F1 ATP synthase subunit epsilonQuickGO ontologyBLASTP
515550551569111407F0F1 ATP synthase subunit betaQuickGO ontologyBLASTP
51571545158014861F0F1 ATP synthase subunit gammaQuickGO ontologyBLASTP
515838851598961509F0F1 ATP synthase subunit alphaQuickGO ontologyBLASTP
51599085160450543F0F1 ATP synthase subunit deltaQuickGO ontologyBLASTP
51604475160953507F0F1 ATP synthase subunit BQuickGO ontologyBLASTP
51610835161301219F0F1 ATP synthase subunit CQuickGO ontologyBLASTP
51613585162077720F0F1 ATP synthase subunit AQuickGO ontologyBLASTP
51620855162477393ATP synthase subunit IQuickGO ontologyBLASTP
51624775162701225hypothetical proteinBLASTP
51632205163849630uracil phosphoribosyltransferaseQuickGO ontologyBLASTP
516412151653621242serine hydroxymethyltransferaseQuickGO ontologyBLASTP
51655795166184606hypothetical proteinBLASTP
51662185166661444ribose-5-phosphate isomerase BQuickGO ontologyBLASTP
51667575167197441low molecular weight phosphotyrosine protein phosphatase family proteinQuickGO ontologyBLASTP
51674445167941498putative PTS system glucose-specific IIA componentQuickGO ontologyBLASTP
51683295168715387membrane proteinQuickGO ontologyBLASTP
51688755169486612hypothetical proteinBLASTP
51698735170388516hypothetical proteinBLASTP
51703995170674276hypothetical proteinBLASTP
51707565170887132hypothetical protein
51709075171455549hypothetical proteinBLASTP
517153351725731041sua5yciOyrdCywlC family proteinQuickGO ontologyBLASTP
51726825173140459hypothetical proteinBLASTP
51731905174056867stage II sporulation protein RQuickGO ontologyBLASTP
51741695175020852N5-glutamine S-adenosyl-L-methionine-dependent methyltransferaseQuickGO ontologyBLASTP
517502051760961077peptide chain release factor 1QuickGO ontologyBLASTP
51764835177070588thymidine kinaseQuickGO ontologyBLASTP
5177179517742424650S ribosomal protein L31QuickGO ontologyBLASTP
517787751791481272transcription termination factor RhoQuickGO ontologyBLASTP
51795885180553966fructose 16-bisphosphatase IIQuickGO ontologyBLASTP
5180577518066993hypothetical proteinBLASTP
518067051819591290UDP-N-acetylglucosamine 1-carboxyvinyltransferaseQuickGO ontologyBLASTP
51822915183148858fructose-bisphosphate aldolaseQuickGO ontologyBLASTP
51833595183727369stage 0 sporulation protein FQuickGO ontologyBLASTP
51839295184453525hypothetical proteinBLASTP
518448451860911608CTP synthetaseQuickGO ontologyBLASTP
51863495186882534DNA-directed RNA polymerase subunit deltaQuickGO ontologyBLASTP
51870375187666630TetR family transcriptional regulatorQuickGO ontologyBLASTP
518773151888701140acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
518889251900221131acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
519009551909468523-hydroxybutyryl-CoA dehydrogenaseQuickGO ontologyBLASTP