Pre_GI Gene

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Host: NC_004556 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004556:531000 Xylella fastidiosa Temecula1, complete genome

Host Lineage: Xylella fastidiosa; Xylella; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1998 from a naturally infected Californian, USA grapevine. This organism was first identified in 1993 as the causal agent of citrus variegated chlorosis, a disease that affects varieties of sweet oranges. Other strains of this species cause a range of diseases in mulberry, pear, almond, elm, sycamore, oak, maple, pecan and coffee which collectively result in multimillion dollar devastation of economically important plants. It does not contain a type III secretion system, but possesses genes for a type II secretion system for export of exoenzymes that degrade the plant cell wall and allow the bacterium to colonize the plant xylem. The cell produces an exopolysaccharide that is similar to the xanthan gum produced by Xanthomonas campestris pv. campestris.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5310645326111548ATP synthase subunit AQuickGO ontologyBLASTP
532661533188528ATP synthase subunit DQuickGO ontologyBLASTP
533192533662471ATP synthase subunit BQuickGO ontologyBLASTP
533782534087306ATP synthase subunit CQuickGO ontologyBLASTP
534151534948798ATP synthase subunit AQuickGO ontologyBLASTP
534978535349372hypothetical proteinBLASTP
53666053697131230S ribosomal protein S10QuickGO ontologyBLASTP
53698653763364850S ribosomal protein L3QuickGO ontologyBLASTP
53764353825160950S ribosomal protein L4QuickGO ontologyBLASTP
53824853855030350S ribosomal protein L23QuickGO ontologyBLASTP
53856253938982850S ribosomal protein L2QuickGO ontologyBLASTP
53939753966627030S ribosomal protein S19QuickGO ontologyBLASTP
53967954001433650S ribosomal protein L22QuickGO ontologyBLASTP
54003354075272030S ribosomal protein S3QuickGO ontologyBLASTP
54075854117141450S ribosomal protein L16QuickGO ontologyBLASTP
54117154136819850S ribosomal protein L29QuickGO ontologyBLASTP
54136554163427030S ribosomal protein S17QuickGO ontologyBLASTP
54165854202636950S ribosomal protein L14QuickGO ontologyBLASTP
54204254235931850S ribosomal protein L24QuickGO ontologyBLASTP
54237154291054050S ribosomal protein L5QuickGO ontologyBLASTP
54292754323230630S ribosomal protein S14QuickGO ontologyBLASTP
54339154378939930S ribosomal protein S8QuickGO ontologyBLASTP
54380254432952850S ribosomal protein L6QuickGO ontologyBLASTP
54441654477536050S ribosomal protein L18QuickGO ontologyBLASTP
54495454549354030S ribosomal protein S5QuickGO ontologyBLASTP
54551354567416250S ribosomal protein L30QuickGO ontologyBLASTP
54568154612444450S ribosomal protein L15QuickGO ontologyBLASTP
5461325475051374preprotein translocase SecYQuickGO ontologyBLASTP
54764654800235730S ribosomal protein S13QuickGO ontologyBLASTP
54801854841039330S ribosomal protein S11QuickGO ontologyBLASTP
54842554905162730S ribosomal protein S4QuickGO ontologyBLASTP
549106550104999DNA-directed RNA polymerase alpha subunitQuickGO ontologyBLASTP
55023655061638150S ribosomal protein L17QuickGO ontologyBLASTP
551384551704321hypothetical proteinBLASTP
5517155532351521competence-related proteinQuickGO ontologyBLASTP
5557825568611080triacylglycerol lipaseQuickGO ontologyBLASTP
5568625579231062lipase chaperoneQuickGO ontologyBLASTP
5585045598051302polysaccharide biosynthetic proteinQuickGO ontologyBLASTP
560948561409462hypothetical proteinBLASTP
56281456289784tRNA-LeuQuickGO ontologyBLASTP
5633185646131296trigger factorQuickGO ontologyBLASTP
564751565377627ATP-dependent Clp protease proteolytic subunitQuickGO ontologyBLASTP
5655055667851281ATP-dependent protease ATP-binding subunitQuickGO ontologyBLASTP