Pre_GI Gene

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Host: NC_010513 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010513:542312 Xylella fastidiosa M12 chromosome, complete genome

Host Lineage: Xylella fastidiosa; Xylella; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: Causal agent of citrus variegated chlorosis. This organism was first identified in 1993 as the causal agent of citrus variegated chlorosis, a disease that affects varieties of sweet oranges. This disease was first noticed in Brazil in 1987, and it greatly affects commercial orchards resulting in crop devastation worldwide. Other strains of this species cause a range of diseases in mulberry, pear, almond, elm, sycamore, oak, maple, pecan and coffee which collectively result in multimillion dollar devastation of economically important plants. The bacteria are transmitted from the gut of the insect vector (sharpshooter leafhopper) to the plant xylem (water conducting system) when the insect feeds. Xylella fastidiosa is similar to Xanthomonas campestris pv. campestris in that it produces a wide variety of pathogenic factors for colonization in a host-specific manner including a large number of fimbrial and afimbrial adhesins for attachment. It does not contain a type III secretion system, but possesses genes for a type II secretion system for export of exoenzymes that degrade the plant cell wall and allow the bacterium to colonize the plant xylem. The cell produces an exopolysaccharide that is similar to the xanthan gum produced by Xanthomonas campestris pv. campestris.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5423125438591548F0F1 ATP synthase subunit alphaQuickGO ontologyBLASTP
543909544436528F0F1 ATP synthase subunit deltaQuickGO ontologyBLASTP
544440544973534F0F1 ATP synthase subunit BQuickGO ontologyBLASTP
545031545336306F0F1 ATP synthase subunit CQuickGO ontologyBLASTP
545400546197798F0F1 ATP synthase subunit AQuickGO ontologyBLASTP
546227546598372hypothetical proteinBLASTP
54793454824531230S ribosomal protein S10QuickGO ontologyBLASTP
54826054890764850S ribosomal protein L3QuickGO ontologyBLASTP
54891954953361550S ribosomal protein L4QuickGO ontologyBLASTP
54953054983230350S ribosomal protein L23QuickGO ontologyBLASTP
54984455067182850S ribosomal protein L2QuickGO ontologyBLASTP
55067955094827030S ribosomal protein S19QuickGO ontologyBLASTP
55095555129634250S ribosomal protein L22QuickGO ontologyBLASTP
55131555203472030S ribosomal protein S3QuickGO ontologyBLASTP
55204055245341450S ribosomal protein L16QuickGO ontologyBLASTP
55245055265020150S ribosomal protein L29QuickGO ontologyBLASTP
55264755291627030S ribosomal protein S17QuickGO ontologyBLASTP
55294055330836950S ribosomal protein L14QuickGO ontologyBLASTP
55330955364133350S ribosomal protein L24QuickGO ontologyBLASTP
55365355419254050S ribosomal protein L5QuickGO ontologyBLASTP
55420955451430630S ribosomal protein S14QuickGO ontologyBLASTP
55467355507139930S ribosomal protein S8QuickGO ontologyBLASTP
55508455561152850S ribosomal protein L6QuickGO ontologyBLASTP
55569855605736050S ribosomal protein L18QuickGO ontologyBLASTP
55623455677354030S ribosomal protein S5QuickGO ontologyBLASTP
55679355695416250S ribosomal protein L30QuickGO ontologyBLASTP
55696155740444450S ribosomal protein L15QuickGO ontologyBLASTP
5574125587851374preprotein translocase subunit SecYQuickGO ontologyBLASTP
55892555928135730S ribosomal protein S13QuickGO ontologyBLASTP
55929755968939330S ribosomal protein S11QuickGO ontologyBLASTP
55970456033062730S ribosomal protein S4QuickGO ontologyBLASTP
560386561384999DNA-directed RNA polymerase subunit alphaQuickGO ontologyBLASTP
56151456189438150S ribosomal protein L17QuickGO ontologyBLASTP
562939563199261hypothetical proteinBLASTP
5632105647301521competence-like proteinQuickGO ontologyBLASTP