Pre_GI Gene

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Host: NC_010001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:4586000 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
45862094586772564phosphodiesterase MJ0936 familyQuickGO ontologyBLASTP
45870284587873846glycerophosphoryl diester phosphodiesteraseQuickGO ontologyBLASTP
45880694588929861hypothetical proteinBLASTP
45889824589401420ATP synthase F1 epsilon subunitQuickGO ontologyBLASTP
458941145908291419ATP synthase F1 beta subunitQuickGO ontologyBLASTP
45908484591723876ATP synthase F1 gamma subunitQuickGO ontologyBLASTP
459174245932501509ATP synthase F1 alpha subunitQuickGO ontologyBLASTP
45933084593856549ATP synthase F1 delta subunitQuickGO ontologyBLASTP
45938444594428585ATP synthase F0 B subunitQuickGO ontologyBLASTP
45944684594728261ATP synthase F0 C subunitQuickGO ontologyBLASTP
45947774595520744ATP synthase F0 A subunitQuickGO ontologyBLASTP
45955594595939381hypothetical protein
45960004596293294hypothetical proteinBLASTP
45965504596978429sugar-phosphate isomerase RpiBLacALacB familyQuickGO ontologyBLASTP
45971104597565456protein tyrosine phosphataseQuickGO ontologyBLASTP
459761045986681059Sua5YciOYrdCYwlC family proteinQuickGO ontologyBLASTP
45987304599443714cell wall hydrolaseautolysinQuickGO ontologyBLASTP
459949846012011704glycoside hydrolase family 18QuickGO ontologyBLASTP
46018314602433603hypothetical protein
460255646039921437serinethreonine protein kinaseQuickGO ontologyBLASTP
46042644605049786Negative regulator of genetic competence sporulation and motility-like proteinQuickGO ontologyBLASTP
46053264605526201conserved hypothetical protein CF-27 familyQuickGO ontologyBLASTP
460578746059541684Fe-4S ferredoxin iron-sulfur binding domain proteinQuickGO ontologyBLASTP
46061804607064885transcriptional regulator MerR familyQuickGO ontologyBLASTP
460733646086641329replicative DNA helicaseQuickGO ontologyBLASTP