Pre_GI Gene

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Host: NC_021182 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_021182:4427468 Clostridium pasteurianum BC1, complete genome

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
44274684428004537ribosomal subunit interface proteinQuickGO ontologyBLASTP
44283884428555168Spo0E like sporulation regulatory proteinQuickGO ontology
44287174428848132hypothetical protein
44291724429849678putative amidophosphoribosyltransferaseQuickGO ontologyBLASTP
442982244308441023hypothetical proteinBLASTP
443095144331582208helicase putative RecDTraA familyQuickGO ontologyBLASTP
443353244347071176S-adenosylmethionine synthetaseQuickGO ontologyBLASTP
4434992443507685tRNA-TyrQuickGO ontologyBLASTP
4435177443525276tRNA-ValQuickGO ontologyBLASTP
4435259443534385tRNA-TyrQuickGO ontologyBLASTP
44355934436249657hypothetical protein
44363584436900543putative sporulation protein YyaCQuickGO ontologyBLASTP
443699744380161020cell shape determining protein MreBMrl familyQuickGO ontologyBLASTP
44381374438391255sporulation transcriptional regulator SpoIIIDQuickGO ontologyBLASTP
44385034439279777metalloendopeptidase-like membrane proteinQuickGO ontologyBLASTP
443954144405871047stage II sporulation protein DQuickGO ontologyBLASTP
444087644421351260UDP-N-acetylglucosamine 1-carboxyvinyltransferaseQuickGO ontologyBLASTP
44423304443133804hypothetical proteinBLASTP
44435024443906405ATP synthase F1 epsilon subunitQuickGO ontologyBLASTP
444392344453201398ATP synthase F1 beta subunitQuickGO ontologyBLASTP
44453334446178846ATP synthase F1 gamma subunitQuickGO ontologyBLASTP
444621844477201503proton translocating ATP synthase F1 alpha subunitQuickGO ontologyBLASTP
44477314448270540ATP synthase F1 delta subunitQuickGO ontologyBLASTP
44482724448751480ATP synthase F0 subunit bQuickGO ontologyBLASTP
44488084449059252ATP synthase F0 subunit cQuickGO ontologyBLASTP
44491644449838675F0F1-type ATP synthase alpha subunitQuickGO ontologyBLASTP
44498444450212369ATP synthase I chainQuickGO ontology