Pre_GI Gene

Some Help

Host: NC_017062 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017062:996197 Rickettsia typhi str. B9991CWPP chromosome, complete genome

Host Lineage: Rickettsia typhi; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, is composed of obligate intracellular pathogens. The latter is composed of two organisms, Rickettsia prowazekii and Rickettsia typhi. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Transovarial transmission (from mother to offspring) occurs in the invertebrate host. This organism causes murine typhus and is an obligate intracellular pathogen that infects both the flea vector and hosts such as human, rat, and mouse. R. prowazekii, and genomic comparisons demonstrate colinearity and similarity to the genome of that organism except for two independent inversions near the origin and terminus. In the flea vector, the bacterium penetrates the gut epithelial barrier and is found in the feces which become infective.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
9961979976811485NADHubiquinone oxidoreductase subunit MQuickGO ontologyBLASTP
998047998634588cytochrome c biogenesis protein CcmAQuickGO ontologyBLASTP
10002911000770480NADH dehydrogenase subunit IQuickGO ontologyBLASTP
100077710017961020NADHubiquinone oxidoreductase subunit HQuickGO ontologyBLASTP
100196510039922028NADH dehydrogenase subunit GQuickGO ontologyBLASTP
10039951004351357hypothetical proteinBLASTP
100452410071602637aconitate hydrataseQuickGO ontologyBLASTP
10073191007651333F0F1 ATP synthase subunit epsilonQuickGO ontologyBLASTP
100776510091891425F0F1 ATP synthase subunit betaQuickGO ontologyBLASTP
10092921010158867F0F1 ATP synthase subunit gammaQuickGO ontologyBLASTP
101023610117741539F0F1 ATP synthase subunit alphaQuickGO ontologyBLASTP
10119111012462552F0F1 ATP synthase subunit deltaQuickGO ontologyBLASTP
101258610139651380dihydrolipoamide dehydrogenaseQuickGO ontologyBLASTP
10142161014650435hypothetical proteinBLASTP
101627210186292358penicillin-binding protein 1AQuickGO ontologyBLASTP
101863310199701338dimethylallyladenosine tRNA methylthiotransferaseQuickGO ontologyBLASTP
10207141021196483hypothetical proteinBLASTP
102118910229161728glutathione-regulated potassium-efflux systemQuickGO ontologyBLASTP
10229131023239327hypothetical proteinBLASTP
10233751023626252hypothetical proteinBLASTP