Pre_GI Gene

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Host: NC_010501 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010501:5735656 Pseudomonas putida W619, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
573565657370621407heavy metal sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
57370625737739678two component heavy metal response transcriptional regulator winged helix familyQuickGO ontologyBLASTP
57379055738111207hypothetical proteinBLASTP
573829357401101818copper-resistance protein CopA familyQuickGO ontologyBLASTP
57401255740448324hypothetical proteinBLASTP
574043857415531116copper resistance B precursorQuickGO ontologyBLASTP
57415645742346783hypothetical proteinBLASTP
57423365742791456protein of unknown function DUF411QuickGO ontologyBLASTP
57432235743555333hypothetical proteinBLASTP
57437015744024324hypothetical proteinBLASTP
57449255745410486hypothetical proteinBLASTP
57455125745736225hypothetical proteinBLASTP
57457805746049270hypothetical protein
574655157476511101hypothetical proteinBLASTP
574760657490751470hypothetical proteinBLASTP
574910057505031404Tn7-like transposition protein CQuickGO ontologyBLASTP
575054157527122172Tn7-like transposition protein BQuickGO ontologyBLASTP
57527055753604900TnsA endonucleaseQuickGO ontologyBLASTP
575387657557111836glucosamine--fructose-6-phosphate aminotransferase isomerizingQuickGO ontologyBLASTP
57557145756490777transcriptional regulator DeoR familyQuickGO ontologyBLASTP
575670357580251323UDP-N-acetylglucosamine pyrophosphorylaseQuickGO ontologyBLASTP
57581915758610420ATP synthase F1 epsilon subunitQuickGO ontologyBLASTP
575865557600311377ATP synthase F1 beta subunitQuickGO ontologyBLASTP
57600595760919861ATP synthase F1 gamma subunitQuickGO ontologyBLASTP
576096857625121545ATP synthase F1 alpha subunitQuickGO ontologyBLASTP
57625345763070537ATP synthase F1 delta subunitQuickGO ontologyBLASTP
57630835763553471ATP synthase F0 B subunitQuickGO ontologyBLASTP
57636105763867258ATP synthase F0 C subunitQuickGO ontologyBLASTP
57640115764880870ATP synthase F0 A subunitQuickGO ontologyBLASTP
57648975765304408ATP synthase I chainQuickGO ontologyBLASTP
57654545766326873parB-like partition proteinQuickGO ontologyBLASTP
57663365767127792Cobyrinic acid ac-diamide synthaseQuickGO ontologyBLASTP
57671465767796651methyltransferase GidBQuickGO ontologyBLASTP
576779357696851893glucose inhibited division protein AQuickGO ontologyBLASTP
577020057715701371tRNA modification GTPase TrmEQuickGO ontologyBLASTP
57716575773339168360 kDa inner membrane insertion proteinQuickGO ontologyBLASTP