Pre_GI: BLASTN Hits

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Query: NC_021182:2219286 Clostridium pasteurianum BC1, complete genome

Start: 2219286, End: 2242150, Length: 22865

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003366:2286083*2286083230615620074Clostridium perfringens str. 13, complete genome2e-90341BLASTN svgBLASTP svg
NC_010723:915697*91569793892123225Clostridium botulinum E3 str. Alaska E43, complete genome5e-88333BLASTN svgBLASTP svg
NC_014393:1782811*1782811180519922389Clostridium cellulovorans 743B chromosome, complete genome1e-85325BLASTN svgBLASTP svg
NC_019970:1991944*1991944200962917686Thermoanaerobacterium thermosaccharolyticum M0795, complete genome3e-83317BLASTN svgBLASTP svg
NC_008262:2169262*2169262218972120460Clostridium perfringens SM101, complete genome3e-61244BLASTN svgBLASTP svg
NC_015555:863173*86317388705323881Thermoanaerobacterium xylanolyticum LX-11 chromosome, complete3e-58234BLASTN svgBLASTP svg
NC_014393:1590893*1590893163877247880Clostridium cellulovorans 743B chromosome, complete genome1e-29139BLASTN svgBLASTP svg
NC_011661:1332309*1332309136399631688Dictyoglomus turgidum DSM 6724, complete genome3e-24121BLASTN svgBLASTP svg
NC_012034:802453*80245382393021478Anaerocellum thermophilum DSM 6725, complete genome1e-23119BLASTN svgBLASTP svg
NC_019908:43600043600045549719498Brachyspira pilosicoli P43/6/78 chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_014330:19544719544722875533309Brachyspira pilosicoli 95/1000 chromosome, complete genome5e-20107BLASTN svgBLASTP svg
NC_014328:2518081*2518081254764529565Clostridium ljungdahlii ATCC 49587 chromosome, complete genome5e-20107BLASTN svgBLASTP svg
NC_013192:1993718*1993718201717323456Leptotrichia buccalis DSM 1135, complete genome5e-20107BLASTN svgBLASTP svg
NC_020291:27023427023430031730084Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome8e-19103BLASTN svgBLASTP svg
NC_021182:3525523*3525523356673741215Clostridium pasteurianum BC1, complete genome3e-18101BLASTN svgBLASTP svg
NC_018604:12639271263927128817424248Brachyspira pilosicoli WesB complete genome8e-1693.7BLASTN svgBLASTP svg
NC_013316:3056925*3056925307934422420Clostridium difficile R20291, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_012225:12134211213421123659923179Brachyspira hyodysenteriae WA1, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_009850:1011293*1011293103921027918Arcobacter butzleri RM4018, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_009089:3142976*3142976316557022595Clostridium difficile 630, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_004557:2078000*2078000210049622497Clostridium tetani E88, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_014328:26435882643588266721023623Clostridium ljungdahlii ATCC 49587 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_020291:1045058*1045058106857123514Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013171:1194500*1194500122104426545Anaerococcus prevotii DSM 20548, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010184:1373375*1373375139433520961Bacillus weihenstephanensis KBAB4, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015520:330500*33050035081720318Mahella australiensis 50-1 BON chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_003997:13340001334000135620422205Bacillus anthracis str. Ames, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_005945:13340001334000135609922100Bacillus anthracis str. Sterne, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007530:13327681332768135609923332Bacillus anthracis str. 'Ames Ancestor', complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014150:25012992501299252472923431Brachyspira murdochii DSM 12563 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014335:1329414*1329414135274423331Bacillus cereus biovar anthracis str. CI chromosome, complete2e-1385.7BLASTN svgBLASTP svg
NC_018607:15059081505908154680040893Brachyspira pilosicoli B2904 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_013515:550464*55046456909918636Streptobacillus moniliformis DSM 12112, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_013517:3082279*3082279310209919821Sebaldella termitidis ATCC 33386, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007168:45400045400047628822289Staphylococcus haemolyticus JCSC1435, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011772:13297301329730135055220823Bacillus cereus G9842, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014328:28727212872721289675024030Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_018643:937486*93748696281825333Alpha proteobacterium HIMB5 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_006274:13673771367377139069223316Bacillus cereus E33L, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008600:1396471*1396471141511318643Bacillus thuringiensis str. Al Hakam, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012121:15781901578190160311524926Staphylococcus carnosus subsp. carnosus TM300, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012472:13395001339500135767118172Bacillus cereus 03BB102, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_018677:111500*11150014809936600Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, complete5e-1177.8BLASTN svgBLASTP svg
NC_005810:43067164306716433058723872Yersinia pestis biovar Microtus str. 91001, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004741:3240909*3240909326236621458Shigella flexneri 2a str. 2457T, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004545:15650*156506959953950Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004337:32497913249791327283723047Shigella flexneri 2a str. 301, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002695:3994970*3994970401809923130Escherichia coli O157:H7 str. Sakai, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_000913:3256307*3256307327821621910Escherichia coli K12, complete genome2e-1075.8BLASTN svgBLASTP svg
CU928160:3344746*3344746336309918354Escherichia coli IAI1 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
CU928145:3608917*3608917363276823852Escherichia coli 55989 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
CP002516:613462*61346263169018229Escherichia coli KO11, complete genome2e-1075.8BLASTN svgBLASTP svg
CP002185:3475991*3475991350005224062Escherichia coli W, complete genome2e-1075.8BLASTN svgBLASTP svg
AC_000091:3258377*3258377328148023104Escherichia coli W3110 DNA, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007613:29818292981829300438522557Shigella boydii Sb227, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008258:32247213224721324719422474Shigella flexneri 5 str. 8401, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009800:3307123*3307123332547318351Escherichia coli HS, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_019978:22461922461924698422366Halobacteroides halobius DSM 5150, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_018419:86250086250088609923600Secondary endosymbiont of Ctenarytaina eucalypti chromosome,2e-1075.8BLASTN svgBLASTP svg
NC_015061:42860004286000431231226313Rahnella sp. Y9602 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011751:37107863710786373513424349Escherichia coli UMN026 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011750:3768692*3768692379303824347Escherichia coli IAI39 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011748:3608917*3608917363276823852Escherichia coli 55989, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010658:3014371*3014371303259918229Shigella boydii CDC 3083-94, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010498:34885133488513350850119989Escherichia coli SMS-3-5, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010473:3354052*3354052337759923548Escherichia coli str. K-12 substr. DH10B, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010468:61381261381263388120070Escherichia coli ATCC 8739, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009801:35950013595001361359918599Escherichia coli E24377A, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015318:249445*24944527619526751Hippea maritima DSM 10411 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_010674:14965001496500152566029161Clostridium botulinum B str. Eklund 17B, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_003030:95918*9591811738721470Clostridium acetobutylicum ATCC 824, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_004722:13520001352000137431822319Bacillus cereus ATCC 14579, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013791:57984257984259814318302Bacillus pseudofirmus OF4 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014654:15816891581689160373022042Halanaerobium sp. 'sapolanicus' chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015687:95918*9591811738721470Clostridium acetobutylicum DSM 1731 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007644:626992*62699269973472743Moorella thermoacetica ATCC 39073, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010003:795355*79535584173746383Petrotoga mobilis SJ95, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011126:1430608*1430608145456623959Hydrogenobaculum sp. Y04AAS1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011296:909558*90955893630226745Thermodesulfovibrio yellowstonii DSM 11347, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015557:1412917*1412917143685823942Hydrogenobaculum sp. 3684 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015587:1414304*1414304143487820575Hydrogenobaculum sp. SHO chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013960:48961648961651178322168Nitrosococcus halophilus Nc4 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012560:1260031*1260031129243132401Azotobacter vinelandii DJ, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008228:81600081600083918923190Pseudoalteromonas atlantica T6c, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010674:311378*31137833031418937Clostridium botulinum B str. Eklund 17B, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010723:14650971465097149459929503Clostridium botulinum E3 str. Alaska E43, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010723:29895429895431770918756Clostridium botulinum E3 str. Alaska E43, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015958:11511115113009918589Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_021182:37715233771523379409922577Clostridium pasteurianum BC1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_021182:40228944022894404142618533Clostridium pasteurianum BC1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015696:47484*474846907921596Francisella sp. TX077308 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010424:531727*53172755409922373Candidatus Desulforudis audaxviator MP104C, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008700:312099*31209934171429616Shewanella amazonensis SB2B, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_021182:40588734058873407780118929Clostridium pasteurianum BC1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009828:14749701474970149745622487Thermotoga lettingae TMO, complete genome3e-0661.9BLASTN svgBLASTP svg