Pre_GI: BLASTN Hits

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Query: NC_015733:2581324 Pseudomonas putida S16 chromosome, complete genome

Start: 2581324, End: 2634334, Length: 53011

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010501:36715173671517370459933083Pseudomonas putida W619, complete genome04643BLASTN svgBLASTP svg
NC_015733:41300004130000414900419005Pseudomonas putida S16 chromosome, complete genome03186BLASTN svgBLASTP svg
NC_015733:715947*71594774917233226Pseudomonas putida S16 chromosome, complete genome03079BLASTN svgBLASTP svg
NC_015733:29635482963548298726023713Pseudomonas putida S16 chromosome, complete genome03047BLASTN svgBLASTP svg
NC_015733:3736104*37361043837697101594Pseudomonas putida S16 chromosome, complete genome02750BLASTN svgBLASTP svg
NC_010501:1286971*1286971131065623686Pseudomonas putida W619, complete genome02222BLASTN svgBLASTP svg
NC_015733:1555476*1555476160259947124Pseudomonas putida S16 chromosome, complete genome02171BLASTN svgBLASTP svg
NC_009512:33345793334579336267428096Pseudomonas putida F1, complete genome01629BLASTN svgBLASTP svg
NC_004129:195347*19534722067225326Pseudomonas fluorescens Pf-5, complete genome01417BLASTN svgBLASTP svg
NC_008463:282565*28256532073638172Pseudomonas aeruginosa UCBPP-PA14, complete genome01247BLASTN svgBLASTP svg
NC_007005:98488*9848813693138444Pseudomonas syringae pv. syringae B728a, complete genome0983BLASTN svgBLASTP svg
NC_005773:106000*10600015088044881Pseudomonas syringae pv. phaseolicola 1448A, complete genome0825BLASTN svgBLASTP svg
NC_021150:49296704929670497270143032Azotobacter vinelandii CA6, complete genome6e-154553BLASTN svgBLASTP svg
NC_012560:49296834929683497271443032Azotobacter vinelandii DJ, complete genome6e-154553BLASTN svgBLASTP svg
NC_015740:14191014191016419522286Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-130476BLASTN svgBLASTP svg
NC_009434:60876560876568209973335Pseudomonas stutzeri A1501, complete genome2e-129472BLASTN svgBLASTP svg
NC_009434:69558269558276739471813Pseudomonas stutzeri A1501, complete genome7e-126460BLASTN svgBLASTP svg
NC_015740:36783423678342371659938258Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-114422BLASTN svgBLASTP svg
NC_015740:34862263486226350909922874Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete6e-114420BLASTN svgBLASTP svg
NC_007492:3462929*3462929350940646478Pseudomonas fluorescens PfO-1, complete genome2e-79305BLASTN svgBLASTP svg
NC_005773:1333863*1333863135559921737Pseudomonas syringae pv. phaseolicola 1448A, complete genome9e-73283BLASTN svgBLASTP svg
NC_012660:2045398*2045398210849663099Pseudomonas fluorescens SBW25 chromosome, complete genome6e-71278BLASTN svgBLASTP svg
AC_000091:2747520*2747520280214854629Escherichia coli W3110 DNA, complete genome2e-67266BLASTN svgBLASTP svg
NC_000913:2746886*2746886280151454629Escherichia coli K12, complete genome2e-67266BLASTN svgBLASTP svg
NC_007384:2933625*2933625295770924085Shigella sonnei Ss046, complete genome2e-67266BLASTN svgBLASTP svg
NC_010473:2839902*2839902288978149880Escherichia coli str. K-12 substr. DH10B, complete genome2e-67266BLASTN svgBLASTP svg
NC_010498:2847359*2847359287165924301Escherichia coli SMS-3-5, complete genome1e-62250BLASTN svgBLASTP svg
AP010958:32387423238742326213723396Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-62250BLASTN svgBLASTP svg
NC_009512:15181131518113155588037768Pseudomonas putida F1, complete genome3e-60242BLASTN svgBLASTP svg
NC_010468:1130000*1130000115350023501Escherichia coli ATCC 8739, complete genome3e-60242BLASTN svgBLASTP svg
NC_011750:2928990*2928990296940040411Escherichia coli IAI39 chromosome, complete genome3e-60242BLASTN svgBLASTP svg
CP002516:1165726*1165726119130025575Escherichia coli KO11, complete genome8e-58234BLASTN svgBLASTP svg
CP002185:2919752*2919752294461024859Escherichia coli W, complete genome8e-58234BLASTN svgBLASTP svg
NC_004741:2741971*2741971276422322253Shigella flexneri 2a str. 2457T, complete genome2e-55226BLASTN svgBLASTP svg
NC_004337:2747917*2747917277096123045Shigella flexneri 2a str. 301, complete genome2e-55226BLASTN svgBLASTP svg
CU928160:2818750*2818750284490226153Escherichia coli IAI1 chromosome, complete genome2e-55226BLASTN svgBLASTP svg
NC_015733:35958823595882362033824457Pseudomonas putida S16 chromosome, complete genome7e-52214BLASTN svgBLASTP svg
NC_015733:42539614253961427610922149Pseudomonas putida S16 chromosome, complete genome2e-49206BLASTN svgBLASTP svg
NC_012660:33203303320330335044730118Pseudomonas fluorescens SBW25 chromosome, complete genome3e-48202BLASTN svgBLASTP svg
NC_010002:29339092933909297250438596Delftia acidovorans SPH-1, complete genome3e-45192BLASTN svgBLASTP svg
NC_008563:2946391*2946391296667220282Escherichia coli APEC O1, complete genome6e-43184BLASTN svgBLASTP svg
NC_007946:29313642931364295051219149Escherichia coli UTI89, complete genome6e-43184BLASTN svgBLASTP svg
NC_008782:1277117*1277117129923122115Acidovorax sp. JS42, complete genome2e-36163BLASTN svgBLASTP svg
NC_008782:32520923252092327781225721Acidovorax sp. JS42, complete genome2e-36163BLASTN svgBLASTP svg
NC_008782:75268675268678696734282Acidovorax sp. JS42, complete genome2e-36163BLASTN svgBLASTP svg
NC_008782:867344*86734489009922756Acidovorax sp. JS42, complete genome2e-36163BLASTN svgBLASTP svg
NC_010102:28817142881714290709925386Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,2e-36163BLASTN svgBLASTP svg
NC_021066:3028421*3028421305110422684Raoultella ornithinolytica B6, complete genome6e-34155BLASTN svgBLASTP svg
NC_015733:26583372658337270338145045Pseudomonas putida S16 chromosome, complete genome9e-33151BLASTN svgBLASTP svg
NC_008463:53135275313527535528941763Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-31147BLASTN svgBLASTP svg
NC_006905:28576992857699289909341395Salmonella enterica subsp. enterica serovar Choleraesuis str1e-31147BLASTN svgBLASTP svg
NC_011080:28979772897977291952121545Salmonella enterica subsp. enterica serovar Newport str. SL254,8e-30141BLASTN svgBLASTP svg
NC_015379:44268274426827444459917773Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,8e-30141BLASTN svgBLASTP svg
NC_011149:28298112829811285287123061Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-29139BLASTN svgBLASTP svg
NC_011083:2847318*2847318291739170074Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,3e-29139BLASTN svgBLASTP svg
NC_008782:31674403167440322216554726Acidovorax sp. JS42, complete genome3e-29139BLASTN svgBLASTP svg
NC_003197:2894344*2894344294288048537Salmonella typhimurium LT2, complete genome3e-29139BLASTN svgBLASTP svg
NC_009439:37702823770282380177231491Pseudomonas mendocina ymp, complete genome2e-24123BLASTN svgBLASTP svg
NC_010505:2530476*2530476255573425259Methylobacterium radiotolerans JCM 2831, complete genome1e-22117BLASTN svgBLASTP svg
NC_010002:4572573*4572573461858346011Delftia acidovorans SPH-1, complete genome5e-22115BLASTN svgBLASTP svg
NC_020211:45982174598217463062032404Serratia marcescens WW4, complete genome2e-21113BLASTN svgBLASTP svg
NC_014153:16635971663597168818424588Thiomonas intermedia K12 chromosome, complete genome8e-21111BLASTN svgBLASTP svg
NC_005773:17688517688520456427680Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-20109BLASTN svgBLASTP svg
NC_008687:96515296515299188826737Paracoccus denitrificans PD1222 chromosome 2, complete sequence5e-19105BLASTN svgBLASTP svg
NC_002488:16389461638946170065561710Xylella fastidiosa 9a5c, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_011662:10179331017933104515827226Thauera sp. MZ1T, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_014910:17650651765065179274827684Alicycliphilus denitrificans BC chromosome, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_015186:347346*34734637448527140Acidiphilium multivorum AIU301, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_008543:12767512767515311825444Burkholderia cenocepacia HI2424 chromosome 2, complete sequence7e-1591.7BLASTN svgBLASTP svg
NC_008061:21068482106848213789431047Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence7e-1591.7BLASTN svgBLASTP svg
NC_008060:3155133*3155133320509949967Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence7e-1591.7BLASTN svgBLASTP svg
NC_006350:19096391909639194004630408Burkholderia pseudomallei K96243 chromosome 1, complete sequence1e-1387.7BLASTN svgBLASTP svg
NC_007434:24497212449721247743327713Burkholderia pseudomallei 1710b chromosome I, complete sequence1e-1387.7BLASTN svgBLASTP svg
NC_009667:1341000*1341000136313822139Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence1e-1387.7BLASTN svgBLASTP svg
NC_014210:53708685370868538907818211Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,1e-1387.7BLASTN svgBLASTP svg
NC_020302:858218582114074254922Corynebacterium halotolerans YIM 70093 = DSM 44683, complete1e-1387.7BLASTN svgBLASTP svg
NC_015383:22903622903624724318208Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence4e-1385.7BLASTN svgBLASTP svg
NC_012724:359444*35944438978130338Burkholderia glumae BGR1 chromosome 1, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_012724:30703863070386309007619691Burkholderia glumae BGR1 chromosome 1, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_012721:25561602556160260386447705Burkholderia glumae BGR1 chromosome 2, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_010623:18714921871492194209470603Burkholderia phymatum STM815 chromosome 2, complete sequence2e-1283.8BLASTN svgBLASTP svg
NC_021150:33039593303959332159917641Azotobacter vinelandii CA6, complete genome7e-1281.8BLASTN svgBLASTP svg
NC_016002:25911892591189261459923411Pseudogulbenkiania sp. NH8B, complete genome7e-1281.8BLASTN svgBLASTP svg
NC_012560:33039613303961332159917639Azotobacter vinelandii DJ, complete genome7e-1281.8BLASTN svgBLASTP svg
NC_007963:3553678*3553678357230918632Chromohalobacter salexigens DSM 3043, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_007952:15875001587500160777020271Burkholderia xenovorans LB400 chromosome 2, complete sequence3e-1179.8BLASTN svgBLASTP svg
NC_004578:5336773*5336773541660879836Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_014830:3156873*3156873318066423792Intrasporangium calvum DSM 43043 chromosome, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_004578:895019*89501992169226674Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_010167:1085106*1085106110813423029Brucella suis ATCC 23445 chromosome II, complete sequence6e-0971.9BLASTN svgBLASTP svg
NC_008782:2062962*2062962208700324042Acidovorax sp. JS42, complete genome6e-0971.9BLASTN svgBLASTP svg
NC_004578:4465247*4465247448346018214Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-0971.9BLASTN svgBLASTP svg
NC_004129:53738865373886545259978714Pseudomonas fluorescens Pf-5, complete genome6e-0971.9BLASTN svgBLASTP svg
NC_020209:49437344943734497459930866Pseudomonas poae RE*1-1-14, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_009512:469000*46900049317124172Pseudomonas putida F1, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_010505:26576832657683268177424092Methylobacterium radiotolerans JCM 2831, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_014923:79370*793709957220203Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete1e-0767.9BLASTN svgBLASTP svg
NC_009007:57804578048230224499Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequence4e-0765.9BLASTN svgBLASTP svg
NC_002947:53864895386489541416727679Pseudomonas putida KT2440, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_003317:392271*39227141315320883Brucella melitensis 16M chromosome I, complete sequence2e-0663.9BLASTN svgBLASTP svg
NC_004310:1578918*1578918160110922192Brucella suis 1330 chromosome I, complete sequence2e-0663.9BLASTN svgBLASTP svg
NC_006932:1596732*1596732161909922368Brucella abortus biovar 1 str. 9-941 chromosome I, complete2e-0663.9BLASTN svgBLASTP svg
NC_007618:1593886*1593886161751623631Brucella melitensis biovar Abortus 2308 chromosome I, complete2e-0663.9BLASTN svgBLASTP svg
NC_010103:1577750*1577750160141623667Brucella canis ATCC 23365 chromosome I, complete sequence2e-0663.9BLASTN svgBLASTP svg
NC_010742:1595065*1595065161869323629Brucella abortus S19 chromosome 1, complete sequence2e-0663.9BLASTN svgBLASTP svg
NC_012560:2451500*2451500248009928600Azotobacter vinelandii DJ, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015312:3675148*3675148374606470917Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015857:1609670*1609670163209922430Brucella pinnipedialis B2/94 chromosome chromosome 1, complete2e-0663.9BLASTN svgBLASTP svg
NC_021150:2451500*2451500248001928520Azotobacter vinelandii CA6, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010170:11521311152131117669424564Bordetella petrii, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_012560:36986973698697372152322827Azotobacter vinelandii DJ, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_015556:11885001188500122602637527Pseudomonas fulva 12-X chromosome, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_021150:36986963698696372152222827Azotobacter vinelandii CA6, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_004578:47813264781326481642335098Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-0661.9BLASTN svgBLASTP svg