Pre_GI Gene

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Host: NC_012660 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012660:3320330 Pseudomonas fluorescens SBW25 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
33203303321244915putative phage integraserecombinaseQuickGO ontologyBLASTP
33216683322525858putative oxidoreductaseQuickGO ontologyBLASTP
332271733239251209transporterQuickGO ontologyBLASTP
332408333256961614putative methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
33257573326116360hypothetical proteinBLASTP
33262163326965750putative oxidoreductaseQuickGO ontologyBLASTP
33272503327480231hypothetical protein
33279943328842849hypothetical proteinBLASTP
33304413331367927hypothetical protein
333156333326001038hypothetical proteinBLASTP
33329913333860870hypothetical protein
33338573334477621hypothetical protein
33352933336165873hypothetical proteinBLASTP
333729833389741677putative methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
333905133403041254putative exported family S43 non-peptidase homologueQuickGO ontologyBLASTP
334039733417011305putative citrate transporterQuickGO ontologyBLASTP
334182833431591332putative aerobic C4-dicarboxylate transport proteinQuickGO ontologyBLASTP
334320433442861083hypothetical proteinBLASTP
33444523345342891putative LysR family transcriptional regulatorQuickGO ontologyBLASTP
334557533469421368putative glutamine synthetaseQuickGO ontologyBLASTP
334701633484131398aminotransferaseQuickGO ontologyBLASTP
33486603349445786putative 3-oxoacyl-acyl-carrier-protein reductaseQuickGO ontologyBLASTP
33495423350447906putative LysR family transcriptional regulatorQuickGO ontologyBLASTP