Pre_GI Gene

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Host: NC_008782 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008782:867344 Acidovorax sp. JS42, complete genome

Host Lineage: Acidovorax; Acidovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Acidovorax sp. JS42, formerly Pseudomonas sp. JS42, was isolated from nitrobenzene-contaminated sediment and is capable of using 2-nitrotolulene as a sole carbon and energy source. 2-nitrotolulene, a nitroaromatic compound, is used in the manufacture of dyes, pigments and explosives. Nitroaromatic compounds, which contain an aromatic ring with one or more nitro groups attached, are a significant contaminant in industrial soils. Acidovorax sp. JS42 degrades 2-nitrotolulene by first removing the nitro moiety producing 3-methylcatechol. The enzyme involved in this process, 2-nitrotolulene dioxygenase, has been purified and characterized.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
867344868051708DNA ligase III-like proteinQuickGO ontologyBLASTP
868057868584528hypothetical protein
8685818699781398hypothetical proteinBLASTP
8700528716351584Chromosome segregation ATPase-like proteinQuickGO ontologyBLASTP
871648872469822IstB domain protein ATP-binding proteinQuickGO ontologyBLASTP
8724598739911533Integrase catalytic regionQuickGO ontologyBLASTP
874052874993942DEAD-like helicases-likeQuickGO ontologyBLASTP
8750158803125298DEADDEAH box helicase domain proteinQuickGO ontologyBLASTP
8803278813671041filamentation induced by cAMP protein FicQuickGO ontologyBLASTP
881907882671765IstB domain protein ATP-binding proteinQuickGO ontologyBLASTP
8826688842631596Integrase catalytic regionQuickGO ontologyBLASTP
884366884896531hypothetical protein
885127886035909plasmid encoded RepA proteinQuickGO ontologyBLASTP
886444886782339hypothetical protein
887111888094984DimethylallyltranstransferaseQuickGO ontologyBLASTP
888268888579312ribosomal protein L21QuickGO ontologyBLASTP
888595888852258ribosomal protein L27QuickGO ontologyBLASTP
8889348900731140GTP1OBG sub domain proteinQuickGO ontologyBLASTP