Pre_GI Gene

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Host: NC_010501 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010501:1286971 Pseudomonas putida W619, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
12869711287087117hypothetical protein
128722512892552031Fusaric acid resistance protein conserved regionQuickGO ontologyBLASTP
12892421289448207protein of unknown function DUF1656QuickGO ontologyBLASTP
12894601290326867secretion protein HlyD family proteinQuickGO ontologyBLASTP
129034112915581218GAF sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
12917441292067324hypothetical protein
129208212931671086diguanylate cyclaseQuickGO ontologyBLASTP
12933911294287897transporter formatenitrite familyQuickGO ontologyBLASTP
1296442129651776tRNA-AlaQuickGO ontologyBLASTP
130017513018181644thiamine pyrophosphate protein domain protein TPP-bindingQuickGO ontologyBLASTP
130202313039571935amine oxidaseQuickGO ontologyBLASTP
13041071305003897Nitrilasecyanide hydratase and apolipoprotein N-acyltransferaseQuickGO ontologyBLASTP
130501413061681155putative integral membrane proteinQuickGO ontology
13061651307154990AsparaginaseglutaminaseQuickGO ontologyBLASTP
13072461307800555yecA family proteinQuickGO ontologyBLASTP
13079751308598624Glutathione S-transferase domainQuickGO ontologyBLASTP
130862613106562031pyridoxamine 5-phosphate oxidase-related FMN-bindingQuickGO ontologyBLASTP