Pre_GI: BLASTN Hits

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Query: NC_010161:1179000 Bartonella tribocorum CIP 105476, complete genome

Start: 1179000, End: 1198581, Length: 19582

Host Lineage: Bartonella tribocorum; Bartonella; Bartonellaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism was isolated from the blood of wild rats and from fleas obtained from wild rats. Transmission of these organisms is often through an insect vector. Once in a host, this intracellular pathogen is internalized by an actin-dependent mechanism, and primarily targets endothelial cells, although other cells can be infected. The proliferation of the vascular endothelium (bacillary angiomatosis) is characterisitic of Bartonella infection and results in multiplication of the bacterium's host cells. Infected macrophages are stimulated to release vascular endothelial growth factor (VEGF) and interleukin 1 beta, both of which promote angiogenesis. Endothelial cells are also stimulated to grow and divide by direct contact with bacterial cells. In addition, programmed cell death (apoptosis) of endothelial cells is inhibited, combatting a common mechanism eukaryotic cells use to deal with bacterial infection. Other pathogenicity factors include pili and outer membrane adhesins for attachment to host cells. This organism is genetically related to Bartonella elizabethae which was isolated from a case of endocarditis in a human.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010161:22355002235500225563020131Bartonella tribocorum CIP 105476, complete genome05727BLASTN svgBLASTP svg
NC_012846:986877986877102533738461Bartonella grahamii as4aup, complete genome02621BLASTN svgBLASTP svg
NC_012846:92957092957095327323704Bartonella grahamii as4aup, complete genome01239BLASTN svgBLASTP svg
NC_010161:25482542548254257609927846Bartonella tribocorum CIP 105476, complete genome2e-43184BLASTN svgBLASTP svg
NC_010161:1501758*1501758153237830621Bartonella tribocorum CIP 105476, complete genome1e-35159BLASTN svgBLASTP svg
NC_012846:17088401708840173059921760Bartonella grahamii as4aup, complete genome5e-35157BLASTN svgBLASTP svg
NC_012846:1147000*1147000116490817909Bartonella grahamii as4aup, complete genome3e-30141BLASTN svgBLASTP svg
NC_010161:596034*59603462009924066Bartonella tribocorum CIP 105476, complete genome1e-29139BLASTN svgBLASTP svg
NC_005956:1019788*1019788103773717950Bartonella henselae str. Houston-1, complete genome2e-25125BLASTN svgBLASTP svg
NC_012587:1181004*1181004120298621983Rhizobium sp. NGR234, complete genome1e-23119BLASTN svgBLASTP svg
NC_005955:1284500*1284500130257118072Bartonella quintana str. Toulouse, complete genome7e-22113BLASTN svgBLASTP svg
NC_014774:1120383*1120383115550835126Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete7e-19103BLASTN svgBLASTP svg
NC_005956:818000*81800084009922100Bartonella henselae str. Houston-1, complete genome3e-18101BLASTN svgBLASTP svg
NC_013440:5509790*5509790553637126582Haliangium ochraceum DSM 14365, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_012587:1203103*1203103122551622414Rhizobium sp. NGR234, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_003116:1018813*1018813104163622824Neisseria meningitidis Z2491, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_008767:804655*80465582578721133Neisseria meningitidis FAM18, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_007576:435713*43571345815822446Lactobacillus sakei subsp. sakei 23K, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_007576:1747662*1747662177048822827Lactobacillus sakei subsp. sakei 23K, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_012796:3600630*3600630368962888999Desulfovibrio magneticus RS-1, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_014972:847099*84709987930632208Desulfobulbus propionicus DSM 2032 chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_008497:1111891*1111891114836436474Lactobacillus brevis ATCC 367, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_010161:23811952381195240409922905Bartonella tribocorum CIP 105476, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_006449:121462*12146214259721136Streptococcus thermophilus CNRZ1066, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006448:5046*50463135826313Streptococcus thermophilus LMG 18311, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006448:351998*35199837421022213Streptococcus thermophilus LMG 18311, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006448:121435*12143514257121137Streptococcus thermophilus LMG 18311, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006086:1329915*1329915136127431360Streptococcus pyogenes MGAS10394, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_005956:1888500*1888500190609917600Bartonella henselae str. Houston-1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004668:3156247*3156247318179425548Enterococcus faecalis V583, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004668:241352*24135226701725666Enterococcus faecalis V583, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006449:345396*34539636548520090Streptococcus thermophilus CNRZ1066, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006449:5046*50463138626341Streptococcus thermophilus CNRZ1066, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_018644:910000*91000093169821699Alpha proteobacterium HIMB59 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015760:8914*89142721018297Streptococcus salivarius CCHSS3, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015760:343874*34387436486020987Streptococcus salivarius CCHSS3, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015760:123929*12392914613122203Streptococcus salivarius CCHSS3, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015572:4209000*4209000424633837339Methylomonas methanica MC09 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012891:1573435*1573435161025436820Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,4e-0867.9BLASTN svgBLASTP svg
NC_011296:1299388*1299388132999530608Thermodesulfovibrio yellowstonii DSM 11347, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007503:2338110*2338110237510836999Carboxydothermus hydrogenoformans Z-2901, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012846:1467446*1467446149844831003Bartonella grahamii as4aup, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_005956:1648000*1648000167344625447Bartonella henselae str. Houston-1, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_003911:1078949*1078949111287933931Silicibacter pomeroyi DSS-3, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_005362:1651767*1651767169076238996Lactobacillus johnsonii NCC 533, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007354:569321*56932160009930779Ehrlichia canis str. Jake, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008346:36176*361765530119126Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete6e-0763.9BLASTN svgBLASTP svg
NC_008530:1551356*1551356158801736662Lactobacillus gasseri ATCC 33323, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010571:2041277*2041277206910427828Opitutus terrae PB90-1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015428:700479*70047972176721289Lactobacillus buchneri NRRL B-30929 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_005956:1221352*1221352124343422083Bartonella henselae str. Houston-1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_005956:1402500*1402500142514422645Bartonella henselae str. Houston-1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_007645:6350079*6350079637233822260Hahella chejuensis KCTC 2396, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_007912:1173752*1173752119609122340Saccharophagus degradans 2-40, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_009662:222964*22296426489641933Nitratiruptor sp. SB155-2, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012673:1540000*1540000156249622497Exiguobacterium sp. AT1b, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012673:1650139*1650139166872118583Exiguobacterium sp. AT1b, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012673:2152639*2152639217371821080Exiguobacterium sp. AT1b, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015259:1803266*1803266182644223177Polymorphum gilvum SL003B-26A1 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_018870:81396*8139610409922704Thermacetogenium phaeum DSM 12270 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010424:1563033*1563033159550932477Candidatus Desulforudis audaxviator MP104C, complete genome9e-0660BLASTN svgBLASTP svg
NC_010516:1*11931119311Clostridium botulinum B1 str. Okra, complete genome9e-0660BLASTN svgBLASTP svg
NC_010516:3807780*3807780384035532576Clostridium botulinum B1 str. Okra, complete genome9e-0660BLASTN svgBLASTP svg
NC_010516:514000*51400053623322234Clostridium botulinum B1 str. Okra, complete genome9e-0660BLASTN svgBLASTP svg
NC_010520:1*11926119261Clostridium botulinum A3 str. Loch Maree, complete genome9e-0660BLASTN svgBLASTP svg
NC_010520:3837378*3837378385959922222Clostridium botulinum A3 str. Loch Maree, complete genome9e-0660BLASTN svgBLASTP svg
NC_010376:606000*60600062469418695Finegoldia magna ATCC 29328, complete genome9e-0660BLASTN svgBLASTP svg
NC_010376:186510*18651024309956590Finegoldia magna ATCC 29328, complete genome9e-0660BLASTN svgBLASTP svg
NC_010337:565730*56573058815822429Heliobacterium modesticaldum Ice1, complete genome9e-0660BLASTN svgBLASTP svg
NC_010337:2793667*2793667283013736471Heliobacterium modesticaldum Ice1, complete genome9e-0660BLASTN svgBLASTP svg
NC_007005:58259255825925584413718213Pseudomonas syringae pv. syringae B728a, complete genome9e-0660BLASTN svgBLASTP svg
NC_004578:60899586089958612236632409Pseudomonas syringae pv. tomato str. DC3000, complete genome9e-0660BLASTN svgBLASTP svg
NC_004557:558500*55850058274124242Clostridium tetani E88, complete genome9e-0660BLASTN svgBLASTP svg
NC_004557:2777291*2777291280449927209Clostridium tetani E88, complete genome9e-0660BLASTN svgBLASTP svg
NC_010520:496500*49650051930622807Clostridium botulinum A3 str. Loch Maree, complete genome9e-0660BLASTN svgBLASTP svg
NC_012563:1*11946419464Clostridium botulinum A2 str. Kyoto, complete genome9e-0660BLASTN svgBLASTP svg
NC_016024:275845*27584529878822944Candidatus Chloracidobacterium thermophilum B chromosome chromosome9e-0660BLASTN svgBLASTP svg
NC_020134:2295092*2295092231709922008Clostridium stercorarium subsp. stercorarium DSM 8532, complete9e-0660BLASTN svgBLASTP svg
NC_018679:3843870*3843870386704523176Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, complete9e-0660BLASTN svgBLASTP svg
NC_016048:2678205*2678205271916340959Oscillibacter valericigenes Sjm18-20, complete genome9e-0660BLASTN svgBLASTP svg
NC_015565:530000*53000055297022971Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete9e-0660BLASTN svgBLASTP svg
NC_015501:938196*93819695746519270Porphyromonas asaccharolytica DSM 20707 chromosome, complete9e-0660BLASTN svgBLASTP svg
NC_014752:617987*61798763975421768Neisseria lactamica ST-640, complete genome9e-0660BLASTN svgBLASTP svg
NC_014752:324832*32483234389919068Neisseria lactamica ST-640, complete genome9e-0660BLASTN svgBLASTP svg
NC_014752:23601*236014343619836Neisseria lactamica ST-640, complete genome9e-0660BLASTN svgBLASTP svg
NC_014752:2087998*2087998211535127354Neisseria lactamica ST-640, complete genome9e-0660BLASTN svgBLASTP svg
NC_013889:1382705*1382705140993927235Thioalkalivibrio sp. K90mix chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_012563:519037*51903754582126785Clostridium botulinum A2 str. Kyoto, complete genome9e-0660BLASTN svgBLASTP svg
NC_012563:4004709*4004709403727332565Clostridium botulinum A2 str. Kyoto, complete genome9e-0660BLASTN svgBLASTP svg
NC_019897:329945*32994537695547011Thermobacillus composti KWC4 chromosome, complete genome9e-0660BLASTN svgBLASTP svg