Pre_GI Gene

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Host: NC_020134 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_020134:2295092 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
22950922296072981catabolite control protein AQuickGO ontologyBLASTP
22961622297115954L-lactate dehydrogenase LdhQuickGO ontologyBLASTP
22971762297343168hypothetical protein
229749522986341140hypothetical protein
229864522999041260phosphoribosylamine--glycine ligase PurDQuickGO ontologyBLASTP
229996723015081542bifunctional purine biosynthesis protein PurHQuickGO ontologyBLASTP
23015532302191639phosphoribosylglycinamide formyltransferase PurNQuickGO ontologyBLASTP
230218523032761092phosphoribosylformylglycinamidine cyclo-ligase PurMQuickGO ontologyBLASTP
23032572303772516N5-carboxyaminoimidazole ribonucleotide mutase PurEQuickGO ontologyBLASTP
23039442304861918hypothetical proteinBLASTP
2304914230600510926-phosphofructokinase 2QuickGO ontologyBLASTP
23060692306563495tRNArRNA methyltransferase SpoUQuickGO ontologyBLASTP
23066392307103465CheC domain proteinQuickGO ontologyBLASTP
2310879231095476tRNA-AlaQuickGO ontologyBLASTP
231315923142831125cell envelope-like transcriptional attenuatorQuickGO ontologyBLASTP
231442523170882664valine--tRNA ligase ValSQuickGO ontologyBLASTP