Pre_GI Gene

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Host: NC_007576 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007576:1747662 Lactobacillus sakei subsp. sakei 23K, complete genome

Host Lineage: Lactobacillus sakei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain (23K) was originally isolated from a French sausage. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus sakei is the predominant lactic acid bacteria found on fresh meat. This organism is used as a starter in the production of fermented meat products, and plays a major role in preserving meat products by inhibiting the growth of other bacteria.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
174766217512713610DNA-directed RNA polymerase beta subunitQuickGO ontology
17513651751862498Putative 4-carboxymuconolactone decarboxylaseQuickGO ontology
17520131752945933Putative phosphate ABC transporter substrate binding lipoprotein precursorQuickGO ontology
175303517550191985Fructose-16-bisphosphataseQuickGO ontology
17549911757510ATPasechaperone ClpC putative specificity factor for ClpP proteaseQuickGO ontology
17575321758018487Transcriptional regulator of stress response CtsRQuickGO ontology
1758161175823474tRNA-ProQuickGO ontology
1758268175833972tRNA-GlyQuickGO ontology
1758366175843974tRNA-ProQuickGO ontology
1758445175851874tRNA-ArgQuickGO ontologyBLASTP
1758530175861889tRNA-LeuQuickGO ontologyBLASTP
1758633175870472tRNA-GlyQuickGO ontology
1758712175878473tRNA-ThrQuickGO ontologyBLASTP
1758820175890384tRNA-LeuQuickGO ontologyBLASTP
1758926175899873tRNA-LysQuickGO ontology
1759001175907373tRNA-ValQuickGO ontologyBLASTP
175908417592001175S ribosomal RNAQuickGO ontologyBLASTP
17592921762210291923S ribosomal RNAQuickGO ontologyBLASTP
1762383176245573tRNA-AlaQuickGO ontology
1762482176255574tRNA-IleQuickGO ontology
17626441763993135016S ribosomal RNAQuickGO ontologyBLASTP
17646961765433738Putative transcriptional regulator FlpFnr familyQuickGO ontology
17654361765984549Putative ferritin-like DNA-binding protein oxidative damage protectant dps-typeQuickGO ontologyBLASTP
17659961766234239Putative heavy metal-chaperonetransport proteinQuickGO ontology
176629617681741879Putative heavy metal-transporting P-type ATPaseQuickGO ontology
17684511769259809hypothetical protein
176920517704881284Putative melibioseNa transport proteinQuickGO ontologyBLASTP
17704591772160Hypothetical cell surface protein precursorQuickGO ontology