Pre_GI: BLASTP Hits

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Query: NC_015259:734795:739811 Polymorphum gilvum SL003B-26A1 chromosome, complete genome

Start: 739811, End: 740503, Length: 693

Host Lineage: Polymorphum gilvum; Polymorphum; ; ; Proteobacteria; Bacteria

General Information: Polymorphum gilvum SL003B-26A1 is a type strain of a newly published novel species in the novel genus Polymorphum. It was isolated from a crude oil-polluted saline soil in Shengli Oilfield, China and could use the crude oil as the sole carbon source. Oil pollution has become a global issue because of its severe ecological impact and destruction. Bioremediation is proved to be an effective process to restore the oil polluted environments. The complete genome sequence of Polymorphum gilvum SL003B-26A1 provides new strategies for bioremediation of oil contaminated environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015259:673662:679113679113679880768Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTranscriptional regulator, LuxR family6e-97353
NC_015259:485015:532878532878533531654Polymorphum gilvum SL003B-26A1 chromosome, complete genomeLuxR family transcriptional regulator1e-79295
NC_014834:614890:624618624618625346729Rhodopseudomonas palustris DX-1 chromosome, complete genomeautoinducer-binding domain-containing protein2e-33142
NC_019973:5650646:568189956818995682624726Mesorhizobium australicum WSM2073, complete genomeDNA-binding protein with HTH domain3e-30131
NC_015675:6276357:630761063076106308335726Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLuxR family transcriptional regulator3e-30131
NC_014923:5868000:587372958737295874466738Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeAutoinducer-binding domain protein1e-28126
NC_019973:5797000:580268958026895803426738Mesorhizobium australicum WSM2073, complete genomeDNA-binding protein with HTH domain1e-28126
NC_015675:6423000:642840064284006429137738Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLuxR family transcriptional regulator1e-28126
NC_010682:460523:492274492274493035762Ralstonia pickettii 12J chromosome 1, complete sequencetranscriptional regulator, LuxR family3e-27122
NC_020453:1025891:102750510275051028296792Agromonas oligotrophica S58 DNA, complete genomehypothetical protein4e-27121
NC_014394:1594071:159742715974271598158732Gallionella capsiferriformans ES-2 chromosome, complete genometranscriptional regulator, LuxR family5e-27120
NC_004463:1992000:203431920343192035080762Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein7e-27120
NC_015637:325561:342547342547343269723Vibrio anguillarum 775 chromosome chromosome II, complete sequenceLuxR family transcriptional regulator6e-26117
NC_015675:6538500:655225765522576553003747Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLuxR family transcriptional regulator2e-25115
NC_014923:5970182:599758959975895998335747Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeAutoinducer-binding domain protein2e-25115
NC_019973:5899142:592654659265465927292747Mesorhizobium australicum WSM2073, complete genomeDNA-binding protein with HTH domain2e-25115
NC_010515:2691000:271900327190032719722720Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, LuxR family7e-25114
NC_011001:2085986:208673720867372087456720Burkholderia cenocepacia J2315 chromosome 2, complete sequenceN-acylhomoserine lactone dependent regulatory protein CepR1e-24113
NC_007511:1147696:117772911777291178448720Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LuxR family2e-24112
NC_016027:194842:203812203812204525714Gluconacetobacter xylinus NBRC 3288, complete genomeN-acylhomoserine lactone-dependent regulatory protein6e-24110
NC_010125:2884762:293002229300222930741720Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulator, luxR family7e-24110
NC_014618:2139639:215415321541532154866714Enterobacter cloacae SCF1 chromosome, complete genomeLuxR family transcriptional regulator3e-22105
NC_014259:3984568:400097840009784001694717Acinetobacter sp. DR1 chromosome, complete genomeTranscriptional activator protein phzR3e-22105
NC_005773:1851116:187462718746271875328702Pseudomonas syringae pv. phaseolicola 1448A, complete genomeautoinducer transcriptional regulator AhlR4e-22104
NC_015566:69190:867278672787458732Serratia sp. AS12 chromosome, complete genomeLuxR family transcriptional regulator1e-21103
NC_015567:69190:867278672787458732Serratia sp. AS9 chromosome, complete genomeLuxR family transcriptional regulator1e-21103
NC_010611:154307:155484155484156200717Acinetobacter baumannii ACICU, complete genomeDNA-binding HTH domain-containing protein1e-21103
NC_010676:304405:325754325754326458705Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, LuxR family1e-21103
NC_016603:3259432:326063032606303261346717Acinetobacter calcoaceticus PHEA-2 chromosome, complete genometranscriptional activator of quorum sensing autoinducer synthesis transcription regulator protein9e-22103
NC_017249:8221992:822574082257408226213474Bradyrhizobium japonicum USDA 6, complete genometranscriptional regulator3e-21102
NC_010410:3777076:379324937932493793965717Acinetobacter baumannii AYE, complete genomeputative Autoinducer-binding transcriptional regulator (LuxR family)2e-21102
NC_011586:164746:165921165921166637717Acinetobacter baumannii AB0057 chromosome, complete genomeeR transcriptional regulator2e-21102
NC_011595:3607402:362357536235753624291717Acinetobacter baumannii AB307-0294, complete genometranscriptional activator protein phzR2e-21102
NC_017171:155836:157012157012157728717Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeautoinducer-binding transcriptional regulator2e-21102
NC_017387:147906:149082149082149798717Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeautoinducer-binding transcriptional regulator2e-21102
NC_007761:3047321:304927530492753050057783Rhizobium etli CFN 42, complete genomeautoinducer transcriptional regulator protein2e-21102
NC_011894:983572:101237610123761013104729Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, LuxR family7e-21100
NC_010172:5036385:503965450396545040385732Methylobacterium extorquens PA1, complete genomeAutoinducer-binding domain protein1e-20100
NC_012779:2755338:276783827678382768557720Edwardsiella ictaluri 93-146, complete genomeAHL-dependent transcriptional regulator2e-2099.4
NC_009085:131000:132302132302132898597Acinetobacter baumannii ATCC 17978, complete genomeeR transcriptional regulator2e-2099.4
NC_012880:135508:146864146864147574711Dickeya dadantii Ech703, complete genometranscriptional regulator, LuxR family5e-2097.8
NC_014817:29795:536405364054386747Asticcacaulis excentricus CB 48 chromosome 2, complete sequencetranscriptional regulator, luxr family1e-1996.7
NC_014500:4691915:471160847116084712360753Dickeya dadantii 3937 chromosome, complete genomeDNA-binding transcriptional regulatory protein ExpR1e-1996.3
NC_020211:554736:562400562400563116717Serratia marcescens WW4, complete genometranscriptional activator protein4e-1995.1
NC_019973:2744000:274754427475442748266723Mesorhizobium australicum WSM2073, complete genomeDNA-binding protein with HTH domain5e-1994.4
NC_015675:2839000:284249128424912843213723Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLuxR family transcriptional regulator5e-1994.4
NC_014923:2672000:267549126754912676213723Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeAutoinducer-binding domain protein5e-1994.4
NC_016818:2836851:285495428549542855640687Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeDNA-binding protein6e-1994.4
NC_004088:1909880:191632619163261917063738Yersinia pestis KIM, complete genometranscriptional activator protein7e-1994
NC_008150:2173708:218657821865782187315738Yersinia pestis Antiqua, complete genomequorum-sensing transcriptional activator YpeR7e-1994
NC_003143:2741478:275476827547682755505738Yersinia pestis CO92, complete genomequorum-sensing transcriptional activator YpeR7e-1994
NC_005810:2508671:252469225246922525429738Yersinia pestis biovar Microtus str. 91001, complete genomequorum-sensing transcriptional activator YpeR7e-1994
NC_017168:2999514:300692830069283007665738Yersinia pestis A1122 chromosome, complete genomequorum-sensing transcriptional activator YpeR7e-1994
NC_011004:2507566:251411225141122514834723Rhodopseudomonas palustris TIE-1, complete genometranscriptional regulator, LuxR family9e-1993.6
NC_007958:2423335:242646424264642427186723Rhodopseudomonas palustris BisB5, complete genomeregulatory protein, LuxR1e-1893.6
NC_013716:3109700:312693731269373127629693Citrobacter rodentium ICC168, complete genomequorum sensing transcriptional regulator CroR1e-1893.2
NC_014310:845527:862340862340863056717Ralstonia solanacearum PSI07 megaplasmid, complete sequenceLuxR family transcriptional regulator2e-1892.8
NC_003296:941920:978998978998979744747Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSCRIPTIONAL ACTIVATOR OF QUORUM SENSING AUTOINDUCER SYNTHESIS TRANSCRIPTION REGULATOR PROTEIN3e-1891.7
NC_007778:3784104:379951837995183800240723Rhodopseudomonas palustris HaA2, complete genometranscriptional regulator, LuxR family4e-1891.7
NC_010557:207846:211136211136211855720Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, LuxR family7e-1890.9
NC_010694:1052722:106386710638671064589723Erwinia tasmaniensis, complete genomeTranscriptional activator protein6e-1890.9
NC_008149:3556999:358796835879683588711744Yersinia pestis Nepal516, complete genomequorum-sensing transcriptional regulator9e-1890.5
NC_010465:893921:900476900476901219744Yersinia pseudotuberculosis YPIII, complete genometranscriptional regulator, LuxR family9e-1890.5
NC_005810:3917254:392651139265113927254744Yersinia pestis biovar Microtus str. 91001, complete genomequorum-sensing transcriptional regulator9e-1890.5
NC_003143:1059580:109199410919941092737744Yersinia pestis CO92, complete genomequorum-sensing transcriptional regulator9e-1890.5
NC_006155:3805640:383807438380743838817744Yersinia pseudotuberculosis IP 32953, complete genomeQuorum-sensing transcriptional regulator9e-1890.5
NC_010159:172469:193682193682194425744Yersinia pestis Angola, complete genometranscriptional regulator, LuxR family9e-1890.5
NC_010634:3720214:375114637511463751889744Yersinia pseudotuberculosis PB1/+, complete genomeLuxR family transcriptional regulator9e-1890.5
NC_008150:317903:325409325409326152744Yersinia pestis Antiqua, complete genomequorum-sensing transcriptional regulator9e-1890.5
NC_004088:3689000:372009637200963720839744Yersinia pestis KIM, complete genometranscriptional activator9e-1890.5
NC_009708:874770:881339881339882082744Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeLuxR family transcriptional regulator9e-1890.5
NC_014029:961522:968094968094968837744Yersinia pestis Z176003 chromosome, complete genomequorum-sensing transcriptional regulator9e-1890.5
NC_017154:902739:910246910246910989744Yersinia pestis D106004 chromosome, complete genomequorum-sensing transcriptional regulator9e-1890.5
NC_017160:905783:912355912355913098744Yersinia pestis D182038 chromosome, complete genomequorum-sensing transcriptional regulator9e-1890.5
NC_017168:3286:125371253713280744Yersinia pestis A1122 chromosome, complete genomequorum-sensing transcriptional regulator9e-1890.5
NC_017265:809943:816515816515817258744Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,quorum-sensing transcriptional regulator9e-1890.5
NC_008391:2045348:205893020589302059619690Burkholderia cepacia AMMD chromosome 2, complete sequencetranscriptional regulator, LuxR family1e-1790.1
NC_009381:588137:594691594691595434744Yersinia pestis Pestoides F chromosome, complete genomequorum-sensing transcriptional regulator1e-1790.1
NC_015566:2125403:213303321330332133737705Serratia sp. AS12 chromosome, complete genomeregulatory protein LuxR1e-1789.7
NC_015567:2125415:213304521330452133749705Serratia sp. AS9 chromosome, complete genomeregulatory protein LuxR1e-1789.7
NC_014258:127500:136873136873137565693Pantoea vagans C9-1 plasmid pPag3, complete sequencetranscriptional activator protein PagR2e-1789.7
NC_010995:1417329:143831214383121439028717Cellvibrio japonicus Ueda107, complete genomeputative two-component transcriptional regulator, LuxR family2e-1789
NC_014834:2206119:223396822339682234687720Rhodopseudomonas palustris DX-1 chromosome, complete genomeautoinducer-binding domain-containing protein4e-1788.2
NC_009254:329700:339382339382340164783Burkholderia vietnamiensis G4 chromosome 3, complete sequenceresponse regulator receiver protein5e-1787.8
NC_012988:5516872:552180955218095522306498Methylobacterium extorquens DM4, complete genomeN-acylhomoserine lactone LuxR family transcriptional regulator3e-1685.5
NC_014838:589581:598794598794599525732Pantoea sp. At-9b plasmid pPAT9B01, complete sequencetranscriptional regulator, LuxR family2e-1582.8
NC_010681:121647:144448144448145068621Burkholderia phytofirmans PsJN chromosome 1, complete sequencetranscriptional regulator, LuxR family2e-1582.4
NC_010514:6000:278042780428550747Methylobacterium radiotolerans JCM 2831 plasmid pMRAD03, completetranscriptional regulator, LuxR family4e-1581.6
NC_020453:6821500:683645968364596837193735Agromonas oligotrophica S58 DNA, complete genometranscriptional regulator, LuxR family7e-1477.4
NC_014837:1570500:157253015725301573252723Pantoea sp. At-9b chromosome, complete genomeLuxR family transcriptional regulator8e-1477.4
NC_015259:673662:682123682123682332210Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTranscriptional regulator, LuxR family4e-1375.1
NC_011982:206784:225258225258225950693Agrobacterium vitis S4 plasmid pTiS4, complete sequencetranscriptional regulator5e-1374.7
NC_011979:2641500:265821026582102658956747Geobacter sp. FRC-32, complete genometranscriptional regulator, LuxR family1e-1273.6
NC_014837:3633378:364479836447983645586789Pantoea sp. At-9b chromosome, complete genomeLuxR family transcriptional regulator3e-1272
NC_012721:2406874:241317024131702413991822Burkholderia glumae BGR1 chromosome 2, complete genomeAutoinducer-binding domain protein5e-1271.2
NC_011146:896000:914063914063914383321Geobacter bemidjiensis Bem, complete genome8e-1270.9
NC_014838:589581:599918599918600643726Pantoea sp. At-9b plasmid pPAT9B01, complete sequenceATP-dependent transcriptional regulator, MalT-like, LuxR family2e-1169.7
NC_009485:1604942:163120516312051631810606Bradyrhizobium sp. BTAi1 chromosome, complete genomeLuxR transcriptional regulator2e-1169.3
NC_010682:3033646:306006730600673060672606Ralstonia pickettii 12J chromosome 1, complete sequencetwo component transcriptional regulator, LuxR family3e-1168.9
NC_012856:2633890:265554826555482656153606Ralstonia pickettii 12D chromosome 1, complete genometwo component transcriptional regulator, LuxR family3e-1168.9
NC_012724:2547500:255223325522332552964732Burkholderia glumae BGR1 chromosome 1, complete genomeTranscriptional regulator, LuxR family protein4e-1065.1
NC_007802:1093785:111506011150601115791732Jannaschia sp. CCS1, complete genometranscriptional regulator, LuxR family3e-0962.4
NC_016816:2953530:298349529834952984217723Pantoea ananatis LMG 5342, complete genometranscriptional activator protein PhzR3e-0962
NC_017162:158289:158289158289158882594Acinetobacter baumannii 1656-2 chromosome, complete genomeER transcriptional regulator6e-0961.2
NC_016027:2512297:252162525216252522323699Gluconacetobacter xylinus NBRC 3288, complete genomeLuxR family transcriptional regulator1e-0860.1
NC_010506:2441944:244888424488842449501618Shewanella woodyi ATCC 51908, complete genomeATP-dependent transcriptional regulator, MalT-like, LuxR family2e-0859.3
NC_015554:4648919:465227746522774653170894Alteromonas sp. SN2 chromosome, complete genometwo-component response regulator4e-0858.2
NC_009436:2685910:270101327010132701735723Enterobacter sp. 638, complete genomeDNA-binding transcriptional activator SdiA6e-0857.8
NC_014006:924417:937890937890938780891Sphingobium japonicum UT26S chromosome 1, complete genomeLuxR-family transcriptional regulator7e-0857.8
NC_015976:2150676:215224821522482153003756Sphingobium sp. SYK-6, complete genomeLuxR family transcriptional regulator1e-0757
NC_016027:2580477:258117025811702581910741Gluconacetobacter xylinus NBRC 3288, complete genomeLuxR family transcriptional regulator1e-0757
NC_016830:5109953:511633851163385116613276Pseudomonas fluorescens F113 chromosome, complete genomeprotein LasR9e-0857
NC_010505:4990472:501816850181685018758591Methylobacterium radiotolerans JCM 2831, complete genometwo component transcriptional regulator, LuxR family1e-0756.6
NC_013446:2961647:296590429659042966623720Comamonas testosteroni CNB-2, complete genometranscriptional regulator, luxR family6e-0754.7
NC_006351:881655:913160913160914050891Burkholderia pseudomallei K96243 chromosome 2, complete sequenceGerR family regulatory protein6e-0754.3
NC_012997:4672147:469455346945534695464912Teredinibacter turnerae T7901, complete genomeresponse regulator receiver domain protein6e-0754.3
NC_007435:2701242:273267027326702733380711Burkholderia pseudomallei 1710b chromosome II, complete sequencetranscriptional regulator, LuxR family7e-0754.3
NC_013959:156991:163782163782164429648Sideroxydans lithotrophicus ES-1 chromosome, complete genometwo component transcriptional regulator, LuxR family1e-0653.5
NC_010943:1884695:188720418872041887908705Stenotrophomonas maltophilia K279a, complete genomeputative LuxR family transcriptional regulatory protein1e-0653.5
NC_012667:504534:503795503795504547753Vibrio cholerae MJ-1236 chromosome 2, complete genometranscriptional regulator LuxR family2e-0653.1
NC_016446:522936:541850541850542569720Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completetranscriptional regulator, LuxR family2e-0653.1
NC_016945:822229:841143841143841862720Vibrio cholerae IEC224 chromosome II, complete sequenceLuxR family transcriptional regulator2e-0653.1
NC_002506:822401:841276841276842037762Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completetranscriptional regulator, LuxR family1e-0653.1
NC_009456:383819:383080383080383841762Vibrio cholerae O395 chromosome 1, complete sequenceLuxR family transcriptional regulator1e-0653.1
NC_012580:796387:815262815262816023762Vibrio cholerae M66-2 chromosome II, complete sequencetranscriptional regulator, LuxR family1e-0653.1
NC_012583:861225:880101880101880862762Vibrio cholerae O395 chromosome chromosome II, complete sequencetranscriptional regulator, LuxR family1e-0653.1
NC_008343:2050000:207171020717102072630921Granulibacter bethesdensis CGDNIH1, complete genometranscriptional regulator, LuxR family2e-0652.8
NC_019757:2243796:224509122450912245771681Cylindrospermum stagnale PCC 7417, complete genomeresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain3e-0652.4
NC_007908:4677856:4680475468047546831592685Rhodoferax ferrireducens T118, complete genomeATP-dependent transcriptional regulator, MalT-like, LuxR family3e-0652
NC_015580:3834244:383854938385493839346798Novosphingobium sp. PP1Y, complete genomeregulatory protein LuxR5e-0651.6
NC_016801:394400:406743406743407444702Corynebacterium diphtheriae C7 (beta) chromosome, complete genometwo-component system response regulator7e-0650.8
NC_008027:2996947:301528030152803015987708Pseudomonas entomophila L48, complete genometranscriptional regulator, luxR family7e-0650.8
NC_015224:4386599:439299643929964393586591Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,two-component system response regulator8e-0650.8