Pre_GI Gene

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Host: NC_009708 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009708:874770 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
873836874786951aerobactin siderophore biosynthesis protein IucBQuickGO ontologyBLASTP
8747708765421773aerobactin siderophore biosynthesis protein IucAQuickGO ontologyBLASTP
8766828779051224major facilitator transporterQuickGO ontologyBLASTP
878195879028834dioxygenase family proteinQuickGO ontologyBLASTP
879102879224123hypothetical protein
8794198807771359hypothetical proteinBLASTP
881339882082744LuxR family transcriptional regulatorQuickGO ontologyBLASTP
882063882713651N-acylhomoserine lactone synthase YtbIQuickGO ontologyBLASTP
883884884534651CAAX amino terminal protease family proteinQuickGO ontologyBLASTP
884659884784126hypothetical proteinBLASTP
884985885380396lipoproteinQuickGO ontologyBLASTP
885448885711264IS1 transposase orfAQuickGO ontologyBLASTP
886255886383129hypothetical proteinBLASTP
887643888143501hypothetical proteinBLASTP
8881868897361551hypothetical proteinBLASTP
8897488911001353hypothetical proteinBLASTP
891097891783687hypothetical proteinBLASTP
8917838935191737OmpA domain-containing proteinQuickGO ontologyBLASTP
893523894014492hypothetical proteinBLASTP
8943088969562649type VI secretion ATPaseQuickGO ontologyBLASTP
8969538993012349type VI secretion system family proteinQuickGO ontologyBLASTP
8993169015382223M23 peptidase domain-containing proteinQuickGO ontologyBLASTP
902342902617276IS1 family transposase orfAQuickGO ontologyBLASTP
9042999065962298M23 peptidase domain-containing proteinQuickGO ontologyBLASTP
906583907350768hypothetical proteinBLASTP
907446907721276IS1 family transposase orfAQuickGO ontologyBLASTP