Pre_GI Gene

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Host: NC_011001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011001:2085986 Burkholderia cenocepacia J2315 chromosome 2, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain is the index strain for transmission among CF patients in the UK. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
20859862086693708putative Mg2 transport ATPaseQuickGO ontologyBLASTP
20867372087456720N-acylhomoserine lactone dependent regulatory protein CepRQuickGO ontologyBLASTP
20875302087973444hypothetical proteinBLASTP
20881842088792609N-acylhomoserine lactone synthase CepIQuickGO ontologyBLASTP
20888452089609765hypothetical proteinBLASTP
20898142090104291hypothetical proteinBLASTP
20904052090791387glyoxalasebleomycin resistancedioxygenase superfamily proteinQuickGO ontologyBLASTP
20919582092368411hypothetical protein
20930372093396360hypothetical protein
20938642094064201hypothetical protein
209411520955031389hypothetical proteinBLASTP
20959082096390483putative phage repressor proteinQuickGO ontology
20965482096655108hypothetical protein
20967052097502798hypothetical proteinBLASTP
20977012098033333hypothetical protein
20980672098768702hypothetical proteinBLASTP
20987712099421651hypothetical proteinBLASTP
20995152100417903hypothetical proteinBLASTP
21008442101170327putative DNA-binding phage proteinQuickGO ontology
21014082101989582putative phage-related endonucleaseQuickGO ontologyBLASTP
21022592102648390hypothetical protein
21027032103359657hypothetical protein
21034422104215774putative phage terminase small subunitQuickGO ontologyBLASTP
210419021055001311putative phage terminase large subunitQuickGO ontologyBLASTP
210551021069701461hypothetical proteinBLASTP
210697421079841011hypothetical protein
21083822108981600hypothetical protein
21090032109779777hypothetical protein
21098612110448588hypothetical protein
211057821116001023hypothetical protein
21116312111750120hypothetical protein
21117962112299504hypothetical protein
21123392112809471hypothetical phage membrane proteinQuickGO ontology
21128222113262441hypothetical protein
21132722114039768putative phage baseplate proteinQuickGO ontologyBLASTP
211405521151071053hypothetical protein
211523721165891353hypothetical proteinBLASTP
21166802117120441hypothetical proteinBLASTP
21172022117735534hypothetical protein
21177392117882144hypothetical protein
211789121199332043hypothetical proteinBLASTP
21208932121555663hypothetical proteinBLASTP
21215652121852288hypothetical protein
212185721230321176hypothetical proteinBLASTP
21230342123459426hypothetical protein
21234932123891399hypothetical proteinBLASTP
212389521251031209hypothetical proteinBLASTP
212515921267391581hypothetical protein
21288102129073264transposaseQuickGO ontologyBLASTP
21290672129930864BLASTP
21316282132182555putative phage lysozymeQuickGO ontologyBLASTP
21324962132912417hypothetical proteinBLASTP
21329192133680762hypothetical proteinBLASTP
213374421347781035putative phage membrane proteinQuickGO ontology
21349522135443492putative DNA-binding phage proteinQuickGO ontologyBLASTP
21381232138584462hypothetical proteinBLASTP
21387432139072330hypothetical proteinBLASTP
21395852139983399putative transcription elongation factorQuickGO ontologyBLASTP
21401302140930801putative integraseQuickGO ontologyBLASTP
21409542141352399putative transposaseQuickGO ontologyBLASTP
214147621425551080putative porinQuickGO ontologyBLASTP
21437652144151387HxlR-family transcriptional regulatorQuickGO ontologyBLASTP
21444772144956480putative cyclaseQuickGO ontologyBLASTP
21451932146008816LuxR superfamily regulatory proteinQuickGO ontologyBLASTP
214642521480501626putative amidohydrolaseQuickGO ontologyBLASTP
21480692148680612putative isochorismataseQuickGO ontologyBLASTP