Pre_GI Gene

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Host: NC_016830 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016830:5109953 Pseudomonas fluorescens F113 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
51099535110204252sel1 domain protein repeat-containing proteinQuickGO ontology
51112315111455225hypothetical proteinBLASTP
51118195112214396hypothetical protein
511235951136301272Long-chain fatty acid transport proteinQuickGO ontologyBLASTP
51137205114271552glutathione peroxidaseQuickGO ontologyBLASTP
51143375114456120hypothetical protein
511445351156521200major facilitator superfamily permeaseQuickGO ontologyBLASTP
51157145116100387MarR family transcriptional regulatorQuickGO ontologyBLASTP
51163385116613276protein LasRQuickGO ontologyBLASTP
511685551215794725YD repeat proteinQuickGO ontologyBLASTP
512171851246092892Imidazoleglycerol-phosphate synthaseQuickGO ontologyBLASTP
512466451269672304Imidazoleglycerol-phosphate synthaseQuickGO ontologyBLASTP
512703451294542421hypothetical proteinBLASTP
512949551309431449hypothetical proteinBLASTP
513120851361844977YD repeat proteinQuickGO ontologyBLASTP