Pre_GI Gene

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Host: NC_011004 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011004:2507566 Rhodopseudomonas palustris TIE-1, complete genome

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from an iron-rich microbial mat from School Street Marsh in Woods Hole, MA, USA. It grows photoautotrophically with Fe(II), H2, or thiosulfate as the electron donor, photoheterotrophically with a variety of organic carbon sources and chemoheterotrophically in the dark. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
25075662508195630hypothetical protein
25082062508478273hypothetical proteinBLASTP
25085622509047486hypothetical proteinBLASTP
25095502509855306hypothetical protein
25107512510909159hypothetical protein
25109952511282288hypothetical proteinBLASTP
25117452512023279hypothetical protein
251276825137841017hypothetical proteinBLASTP
25141122514834723transcriptional regulator LuxR familyQuickGO ontologyBLASTP
25149242515562639autoinducer synthesis proteinQuickGO ontologyBLASTP
25184912518646156hypothetical protein
251879825202611464hypothetical proteinBLASTP
252041025221821773hypothetical proteinBLASTP
25226892522961273hypothetical proteinBLASTP
252299325244441452hypothetical proteinBLASTP
2524629252469971tRNA-SerQuickGO ontology
25248822525508627hypothetical protein
252565425280112358Ornithine decarboxylaseQuickGO ontologyBLASTP
25280342528576543GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
25286982529057360hypothetical proteinBLASTP
252911225303831272outer membrane efflux proteinQuickGO ontologyBLASTP
25303802531375996efflux transporter RND family MFP subunitQuickGO ontologyBLASTP