Pre_GI: BLASTP Hits

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Query: NC_009654:4716417:4748304 Marinomonas sp. MWYL1, complete genome

Start: 4748304, End: 4749335, Length: 1032

Host Lineage: Marinomonas; Marinomonas; Oceanospirillaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: Marinomonas MWYL1 was isolated from the root surface of the salt marsh grass Spartina anglica, growing near the North Norfolk, England village of Stiffkey. The genus Marinomonas comprises a widespread group of g -proteobacteria that exist in coastal waters, and which had been earlier been included in the genus Alteromonas. The interest in Marinomonas MWYL 1 was that it could grow on the betaine molecule Dimethylsulphoniopropionate (DMSP) as sole carbon source and, when it did do, it released large amounts of the gas dimethyl sulphide. DMSP is a compatible solute that is used by many marine phytoplankton and seaweed macroalgae as an osmoticum and an anti-stress compound. In addition, a few known land angiosperms make DMSP and these include certain species of Spartina - hence the choice of these plants as a source for DMSP-degrading bacteria. Indeed, others had shown previously that the DMSP-catabolising bacteria isolated from Spartina root surfaces included Marinomonas strains.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015183:51500:6693166931679531023Agrobacterium sp. H13-3 chromosome, complete genomesugar ABC transporter substrate-binding protein2e-117422
NC_003304:51048:6655166551675731023Agrobacterium tumefaciens str. C58 chromosome circular, completeABC transporter, substrate binding protein [sugar]2e-116419
NC_003062:50756:6635066350673721023Agrobacterium tumefaciens str. C58 chromosome circular, completehypothetical protein2e-116419
NC_009952:366959:3717153717153727281014Dinoroseobacter shibae DFL 12, complete genomeD-ribose-binding periplasmic protein precursor3e-113408
NC_018644:602200:6062126062126072461035Alpha proteobacterium HIMB59 chromosome, complete genomeperiplasmic solute-binding protein3e-104379
NC_009921:8549757:856932885693288570305978Frankia sp. EAN1pec, complete genomeperiplasmic binding protein/LacI transcriptional regulator8e-79294
NC_009921:8549757:8579736857973685808271092Frankia sp. EAN1pec, complete genomeperiplasmic binding protein/LacI transcriptional regulator5e-76284
NC_015061:3840463:3872674387267438736871014Rahnella sp. Y9602 chromosome, complete genomeLacI family transcriptional regulator1e-73276
NC_017047:3936624:3940088394008839411011014Rahnella aquatilis HX2 chromosome, complete genomeLacI family transcriptional regulator2e-73276
NC_016818:3887000:3888784388878438897971014Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completesugar ABC transporter periplasmic protein2e-72273
NC_016614:686887:702059702059702937879Vibrio sp. EJY3 chromosome 2, complete sequenceD-ribose transporter subunit RbsB3e-21102
NC_012785:638000:649402649402650280879Kosmotoga olearia TBF 19.5.1, complete genomeperiplasmic binding protein/LacI transcriptional regulator4e-2099.4
NC_012559:1635922:163844016384401639369930Laribacter hongkongensis HLHK9, complete genomeRbsB6e-2098.6
NC_013850:2685835:271637227163722717325954Klebsiella variicola At-22 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator4e-1995.9
NC_015425:2024154:204235720423572043271915Clostridium botulinum BKT015925 chromosome, complete genomeribose ABC transporter periplasmic D-ribose-binding protein5e-1995.5
NC_016633:2655811:266334826633482664292945Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomesugar ABC transporter periplasmic protein1e-1894.4
NC_018665:2163713:218209821820982183012915Exiguobacterium antarcticum B7 chromosome, complete genomePeriplasmic binding protein/LacI transcriptional regulator3e-1892.8
NC_008593:1797000:181560418156041816518915Clostridium novyi NT, complete genomeribose ABC transporter, periplasmic D-ribose-binding protein8e-1891.7
NC_015161:1556766:156531915653191566305987Deinococcus proteolyticus MRP chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator8e-1891.3
NC_011283:2684046:271157727115772712530954Klebsiella pneumoniae 342 chromosome, complete genomesugar-binding domain protein, LacI family9e-1891.3
NC_010556:2328303:234419623441962345110915Exiguobacterium sibiricum 255-15, complete genomeperiplasmic binding protein/LacI transcriptional regulator2e-1790.1
NC_011978:1581994:158656415865641587544981Thermotoga neapolitana DSM 4359, complete genomeRibose ABC transporter, periplasmic ribose-binding protein7e-1788.2
NC_000853:960248:975775975775976746972Thermotoga maritima MSB8, complete genomeribose ABC transporter, periplasmic ribose-binding protein7e-1788.2
NC_013205:2332174:233878923387892339754966Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,periplasmic binding protein/LacI transcriptional regulator1e-1687.4
NC_015732:140087:147960147960148913954Spirochaeta caldaria DSM 7334 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator3e-1583.2
NC_009655:195500:207716207716208648933Actinobacillus succinogenes 130Z chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator4e-1582.8
NC_015137:2616222:264696226469622647912951Burkholderia sp. CCGE1001 chromosome 2, complete sequenceperiplasmic-binding protein/LacI transcriptional regulator5e-1582.4
NC_002516:2113186:213085421308542131813960Pseudomonas aeruginosa PAO1, complete genomebinding protein component precursor of ABC ribose transporter5e-1582
NC_012691:2146473:215675721567572157689933Tolumonas auensis DSM 9187, complete genomeperiplasmic binding protein/LacI transcriptional regulator1e-1481.3
NC_015589:1468774:149197714919771492936960Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator2e-1480.1
NC_015732:140087:149047149047149997951Spirochaeta caldaria DSM 7334 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator3e-1479.7
NC_010939:1920781:192330219233021924174873Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeD-ribose-binding periplasmic protein precursor3e-1479.3
NC_021177:7159654:7177869717786971798241956Streptomyces fulvissimus DSM 40593, complete genomeD-ribose ABC transporter permease protein6e-1478.6
NC_010184:661226:672022672022672945924Bacillus weihenstephanensis KBAB4, complete genomeMonosaccharide-transporting ATPase9e-1478.2
NC_004088:1291754:129781912978191298748930Yersinia pestis KIM, complete genomeperiplasmic solute-binding protein of ABC transporter1e-1377.8
NC_009053:1895485:189800218980021898874873Actinobacillus pleuropneumoniae L20, complete genomeD-ribose-binding periplasmic protein precursor1e-1377.8
NC_000913:4307471:430913043091304310065936Escherichia coli K12, complete genomeD-allose transporter subunit2e-1377
NC_010468:4305105:432191943219194322854936Escherichia coli ATCC 8739, complete genomeMonosaccharide-transporting ATPase2e-1377
CP002516:4431235:444855644485564449491936Escherichia coli KO11, complete genomeperiplasmic binding protein/LacI transcriptional regulator2e-1377
NC_010473:4409492:440949244094924410427936Escherichia coli str. K-12 substr. DH10B, complete genomeD-allose transporter subunit; periplasmic-binding component of ABC superfamily2e-1377
AC_000091:4313167:431578543157854316720936Escherichia coli W3110 DNA, complete genomeD-allose transporter subunit2e-1377
NC_012759:4247865:424786542478654248800936Escherichia coli BW2952 chromosome, complete genomeD-allose transporter subunit2e-1377
NC_012947:4106031:412324441232444124179936Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeD-allose transporter subunit2e-1377
NC_012967:4289929:428992942899294290864936Escherichia coli B str. REL606 chromosome, complete genomeD-allose transporter subunit2e-1377
NC_016902:4431235:444855644485564449491936Escherichia coli KO11FL chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator2e-1377
NC_014377:1871333:187802218780221879011990Thermosediminibacter oceani DSM 16646 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator3e-1376.6
AP010958:5022196:502219650221965023131936Escherichia coli O103:H2 str. 12009 DNA, complete genomeD-allose-binding periplasmic protein3e-1376.3
NC_013353:5022196:502219650221965023131936Escherichia coli O103:H2 str. 12009, complete genomeD-allose-binding periplasmic protein3e-1376.3
NC_003143:2895617:290166829016682902597930Yersinia pestis CO92, complete genomeputative sugar-binding periplasmic protein3e-1376.3
NC_008149:1221637:122772012277201228649930Yersinia pestis Nepal516, complete genomesugar-binding periplasmic protein3e-1376.3
NC_017154:3094000:310740531074053108334930Yersinia pestis D106004 chromosome, complete genomeputative sugar-binding periplasmic protein3e-1376.3
NC_016113:11500:2570925709276581950Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceD-ribose ABC transporter permease4e-1375.9
NC_018604:1263927:128147612814761282471996Brachyspira pilosicoli WesB complete genomeD-allose-binding periplasmic protein4e-1375.9
NC_011725:681387:690825690825691751927Bacillus cereus B4264 chromosome, complete genomeribose ABC transporter ribose-binding protein4e-1375.9
NC_009654:4716417:474526347452634746240978Marinomonas sp. MWYL1, complete genomeperiplasmic binding protein/LacI transcriptional regulator4e-1375.9
NC_011969:726369:736252736252737178927Bacillus cereus Q1 chromosome, complete genomeribose ABC transporter substrate-binding protein6e-1375.5
NC_011772:647778:658732658732659658927Bacillus cereus G9842, complete genomeribose ABC transporter, ribose-binding protein7e-1375.1
NC_016771:701909:714612714612715538927Bacillus cereus NC7401, complete genomeribose ABC transporter substrate-binding protein6e-1375.1
NC_017208:671128:682902682902683828927Bacillus thuringiensis serovar chinensis CT-43 chromosome, completemethylthioribose-binding protein1e-1274.3
NC_019973:1731626:175841217584121759389978Mesorhizobium australicum WSM2073, complete genomeABC-type sugar transport system, periplasmic component7e-1271.6
NC_013721:1581370:159778915977891598727939Gardnerella vaginalis 409-05, complete genomeperiplasmic binding protein and sugar binding domain of the LacI family protein8e-1271.6
NC_013282:3781149:378282937828293783734906Cronobacter turicensis, complete genomeABC transporter periplasmic-binding protein ytfQ9e-1271.2
NC_003155:6444500:6444518644451864464641947Streptomyces avermitilis MA-4680, complete genomeD-ribose ABC transporter permease protein1e-1171.2
NC_020211:3535622:355672535567253557642918Serratia marcescens WW4, complete genomeribose ABC superfamily ATP binding cassette transporter, binding protein1e-1170.9
NC_007644:626992:637402637402638382981Moorella thermoacetica ATCC 39073, complete genomePeriplasmic binding protein/LacI transcriptional regulator1e-1170.9
NC_015675:1721543:174843017484301749407978Mesorhizobium opportunistum WSM2075 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator2e-1170.5
NC_014206:3391352:3394558339455833955711014Geobacillus sp. C56-T3 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator2e-1170.1
NC_008541:2037793:204289820428982043854957Arthrobacter sp. FB24 chromosome 1, complete sequenceperiplasmic binding protein/LacI transcriptional regulator4e-1169.3
NC_008786:2425314:242531424253142426276963Verminephrobacter eiseniae EF01-2, complete genomeperiplasmic binding protein/LacI transcriptional regulator5e-1168.9
NC_014393:4612301:462552646255264626518993Clostridium cellulovorans 743B chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator5e-1168.9
NC_015968:1165829:116906511690651170006942Enterobacter asburiae LF7a chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator7e-1168.6
NC_011899:1021672:103036310303631031325963Halothermothrix orenii H 168, complete genomeperiplasmic binding protein/LacI transcriptional regulator7e-1168.6
NC_006155:3805640:380564038056403806599960Yersinia pseudotuberculosis IP 32953, complete genomeputative sugar ABC transporter periplasmic binding protein6e-1168.6
NC_017167:674511:687737687737688525789Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1periplasmic binding protein/LacI transcriptional regulator6e-1168.6
NC_003143:1059580:105958010595801060539960Yersinia pestis CO92, complete genomeputative sugar ABC transporter periplasmic binding protein1e-1067.8
NC_017954:934616:9372219372219382581038Thermogladius cellulolyticus 1633 chromosome, complete genomesugar ABC transporter periplasmic protein2e-1067
NC_015519:686027:7030847030847040851002Tepidanaerobacter sp. Re1 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator2e-1067
NC_010634:4463727:446372744637274464671945Yersinia pseudotuberculosis PB1/+, complete genomeperiplasmic binding protein/LacI transcriptional regulator2e-1067
NC_019897:2696587:270632827063282707290963Thermobacillus composti KWC4 chromosome, complete genomesugar ABC transporter substrate-binding protein3e-1066.2
NC_008254:3980327:399879339987933999755963Mesorhizobium sp. BNC1, complete genomeperiplasmic binding protein/LacI transcriptional regulator4e-1066.2
NC_013956:1994970:199497019949701995926957Pantoea ananatis LMG 20103 chromosome, complete genomeYtfQ4e-1065.9
NC_016816:2508204:252696125269612527917957Pantoea ananatis LMG 5342, complete genomeABC transporter substrate-binding protein4e-1065.9
NC_009328:1903291:192429219242921925248957Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeD-ribose-binding periplasmic protein4e-1065.9
NC_012559:978419:997323997323998321999Laribacter hongkongensis HLHK9, complete genomeRbsB protein5e-1065.5
NC_017075:1837966:184170618417061842662957Rubrivivax gelatinosus IL144, complete genomeribose ABC transporter substrate binding protein RbsB5e-1065.5
NC_014039:15236:203392033921280942Propionibacterium acnes SK137 chromosome, complete genomeribose ABC transport system, permease protein RbsC/ribose ABC transport system, periplasmic ribose-binding protein RbsB5e-1065.5
NC_006085:15246:203502035021291942Propionibacterium acnes KPA171202, complete genomeperiplasmic sugar-binding protein5e-1065.5
NC_016512:15102:202062020621147942Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeperiplasmic sugar-binding protein5e-1065.5
NC_016511:15100:202042020421145942Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeperiplasmic sugar-binding protein5e-1065.5
NC_017218:1655009:167658716765871677531945Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeD-ribose-binding periplasmic protein8e-1065.1
NC_016516:15102:202062020621147942Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeperiplasmic sugar-binding protein6e-1065.1
NC_007348:752692:775547775547776515969Ralstonia eutropha JMP134 chromosome 2, complete sequencePeriplasmic binding protein/LacI transcriptional regulator1e-0964.7
NC_014364:815346:849154849154850110957Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator2e-0963.5
NC_012796:4693500:4696500469650046975371038Desulfovibrio magneticus RS-1, complete genomeputative D-ribose-binding periplasmic protein precursor3e-0962.8
NC_005810:3493607:350754635075463508502957Yersinia pestis biovar Microtus str. 91001, complete genomeputative periplasmic protein precursor4e-0962.8
NC_011297:290737:300524300524301462939Dictyoglomus thermophilum H-6-12, complete genomeABC sugar transporter periplasmic ligand binding protein6e-0962
NC_011661:409943:4184244184244194281005Dictyoglomus turgidum DSM 6724, complete genomerhamnose ABC transporter, periplasmic rhamnose-binding protein7e-0962
NC_015519:1888917:1904377190437719053991023Tepidanaerobacter sp. Re1 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator8e-0961.6
NC_007644:2099878:2109667210966721108121146Moorella thermoacetica ATCC 39073, complete genomePeriplasmic binding protein/LacI transcriptional regulator8e-0961.6
NC_011297:290737:3016963016963027001005Dictyoglomus thermophilum H-6-12, complete genomerhamnose ABC transporter rhamnose-binding protein8e-0961.6
NC_006274:659922:675287675287676213927Bacillus cereus E33L, complete genomeribose ABC transporter, ribose-binding protein2e-0860.8
NC_003997:674265:686955686955687881927Bacillus anthracis str. Ames, complete genomeribose ABC transporter, ribose-binding protein2e-0860.8
NC_005945:674337:686851686851687777927Bacillus anthracis str. Sterne, complete genomeribose ABC transporter, ribose-binding protein2e-0860.8
NC_007530:674265:686956686956687882927Bacillus anthracis str. 'Ames Ancestor', complete genomeribose abc transporter, ribose-binding protein2e-0860.8
NC_011773:688689:701393701393702319927Bacillus cereus AH820 chromosome, complete genomeribose ABC transporter ribose-binding protein2e-0860.8
NC_012659:678289:686856686856687782927Bacillus anthracis str. A0248, complete genomeribose ABC transporter, ribose-binding protein2e-0860.8
NC_016779:657568:668365668365669291927Bacillus cereus F837/76 chromosome, complete genomeribose ABC transporter substrate-binding protein RbsB2e-0860.8
NC_011750:4719477:471947747194774720412936Escherichia coli IAI39 chromosome, complete genomeD-allose transporter subunit1e-0860.8
NC_004431:4867648:487026648702664871207942Escherichia coli CFT073, complete genomeD-allose-binding periplasmic protein precursor1e-0860.8
NC_008563:4656000:465777346577734658714942Escherichia coli APEC O1, complete genomeD-allose-binding periplasmic protein precursor1e-0860.8
NC_010498:4656716:465671646567164657657942Escherichia coli SMS-3-5, complete genomeD-allose-binding periplasmic protein AlsB1e-0860.8
NC_008253:4541915:454383245438324544773942Escherichia coli 536, complete genomeD-allose-binding periplasmic protein precursor1e-0860.8
NC_011415:4582388:458238845823884583323936Escherichia coli SE11 chromosome, complete genomeD-allose transporter subunit1e-0860.8
NC_011742:4569683:457230145723014573236936Escherichia coli S88 chromosome, complete genomeD-allose transporter subunit1e-0860.8
NC_005957:667954:677838677838678764927Bacillus thuringiensis serovar konkukian str. 97-27, completeribose ABC transporter, ribose-binding protein2e-0860.1
NC_016590:1380092:139483113948311395823993Burkholderia sp. YI23 chromosome 3, complete sequenceputative substrate binding component of ABC transporter3e-0859.7
NC_011661:409943:417255417255418193939Dictyoglomus turgidum DSM 6724, complete genomeperiplasmic binding protein/LacI transcriptional regulator3e-0859.7
NC_014364:2863686:2873341287334128743871047Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeribose ABC transporter, substrate binding protein5e-0858.9
NC_019673:8057941:808099480809948081962969Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, LacI family8e-0858.2
NC_013642:942767:9505839505839516351053Thermotoga naphthophila RKU-10, complete genomeperiplasmic binding protein/LacI transcriptional regulator2e-0757
NC_014837:33014:541895418955181993Pantoea sp. At-9b chromosome, complete genomeD-xylose ABC transporter periplasmic substrate-binding protein9e-0754.7
NC_009925:4864367:4883577488357748856852109Acaryochloris marina MBIC11017, complete genomeperiplasmic binding protein/LacI transcriptional regulator, putative1e-0653.9
NC_010320:143109:1535381535381546441107Thermoanaerobacter sp. X514 chromosome, complete genomeD-xylose ABC transporter periplasmic substrate-binding protein2e-0653.9
NC_014538:187747:1934041934041945101107Thermoanaerobacter sp. X513 chromosome, complete genomeD-xylose ABC transporter periplasmic substrate-binding protein2e-0653.9
NC_008149:2366500:237259523725952373512918Yersinia pestis Nepal516, complete genomesugar binding protein precursor2e-0653.5
NC_010159:1818500:182484918248491825766918Yersinia pestis Angola, complete genomeribose ABC transporter, periplasmic ribose-binding protein2e-0653.5
NC_003143:2804500:281081128108112811728918Yersinia pestis CO92, complete genomesugar binding protein precursor2e-0653.5
NC_005810:2549680:257686525768652577782918Yersinia pestis biovar Microtus str. 91001, complete genomesugar binding protein precursor2e-0653.5
NC_010634:2894631:292192029219202922837918Yersinia pseudotuberculosis PB1/+, complete genomeperiplasmic binding protein/LacI transcriptional regulator2e-0653.5
NC_006155:2979500:300397330039733004890918Yersinia pseudotuberculosis IP 32953, complete genomeABC transporter, periplasmic sugar (possibly sorbitol) binding protein2e-0653.5
NC_004088:1851500:186044218604421861359918Yersinia pestis KIM, complete genomesolute binding protein of ABC transporter2e-0653.5
NC_009381:2138625:216301921630192163936918Yersinia pestis Pestoides F chromosome, complete genomesugar binding protein2e-0653.5
NC_016641:2894899:2908219290821929092261008Paenibacillus terrae HPL-003 chromosome, complete genomesugar ABC transporter periplasmic protein2e-0653.5
NC_017265:1571305:158152315815231582440918Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,sugar binding protein2e-0653.5
NC_017168:2941938:295070829507082951625918Yersinia pestis A1122 chromosome, complete genomesugar binding protein2e-0653.5
NC_017154:2804000:281028428102842811201918Yersinia pestis D106004 chromosome, complete genomesugar binding protein2e-0653.5
NC_014029:2756500:276313427631342764051918Yersinia pestis Z176003 chromosome, complete genomesugar binding protein2e-0653.5
NC_009708:1735903:174822617482261749143918Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeribose ABC transporter periplasmic protein2e-0653.5
NC_013521:107937:110667110667111626960Sanguibacter keddieii DSM 10542, complete genomemonosaccharide-binding protein3e-0653.1
NC_006347:3805500:3809824380982438125472724Bacteroides fragilis YCH46, complete genometwo-component system sensor histidine kinase/response regulator hybrid5e-0652.4
NC_015588:1847500:185576418557641856759996Isoptericola variabilis 225 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator1e-0551.2