Pre_GI: BLASTP Hits

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Query: NC_008710:108057:127865 Borrelia turicatae 91E135, complete genome

Start: 127865, End: 130567, Length: 2703

Host Lineage: Borrelia turicatae; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in the USA from the soft tick Ornithodoros turicatae. Borrelia turicatae is the causative agent of tick-borne relapsing fever in the southwestern USA. Ticks become infected with Borrelia while feeding on an infected mammal, usually a rodent or squirrel. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the spirochete into a mammalian host through its infectious saliva. Relapsing fever is characterized by period of chills, fever, headache, and malaise, followed by an asymptomatic, followed by another episode of symptoms. The cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010673:113133:1281021281021308072706Borrelia hermsii DAH, complete genometranscription elongation factor GreA01645
NC_014484:1163576:1198728119872812014242697Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein1e-143511
NC_021508:12543:1936819368220492682Treponema pallidum subsp. pallidum SS14, complete genometranscription elongation factor GreA4e-132473
NC_016848:12548:1937319373220542682Treponema pallidum subsp. pertenue str. CDC2 chromosome, completetranscription elongation factor GreA6e-132472
NC_016843:1:1937319373220542682Treponema pallidum subsp. pertenue str. Gauthier chromosome,transcription elongation factor GreA6e-132472
NC_016842:1:1937319373220542682Treponema pallidum subsp. pertenue str. SamoaD chromosome, completetranscription elongation factor GreA6e-132472
NC_017268:1:1937119371220522682Treponema pallidum subsp. pallidum str. Chicago chromosome,7e-132471
NC_016844:12545:1937019370220512682Treponema pallidum subsp. pallidum DAL-1 chromosome, completetranscription elongation factor GreA7e-132471
NC_010741:12542:1941519415213881974Treponema pallidum subsp. pallidum SS14, complete genometranscription elongation factor3e-87323
NC_000919:12545:1941819418213911974Treponema pallidum subsp. pallidum str. Nichols, complete genometranscription elongation factor6e-87322
NC_019908:1296870:1311199131119913134062208Brachyspira pilosicoli P43/6/78 chromosome, complete genometranscript cleavage factor/hypothetical protein8e-34146
NC_000919:12545:215582155822046489Treponema pallidum subsp. pallidum str. Nichols, complete genometranscription elongation factor (greA)1e-32142
NC_010741:12542:215552155522043489Treponema pallidum subsp. pallidum SS14, complete genometranscription elongation factor GreA1e-32142
NC_020075:114790:116759116759117235477Candidatus Blochmannia chromaiodes str. 640, complete genometranscription elongation factor GreA2e-1895.1
NC_020063:528296:528296528296528772477Enterobacteriaceae bacterium strain FGI 57, complete genometranscription elongation factor GreA4e-1894.4
NC_007292:113396:116889116889117365477Candidatus Blochmannia pennsylvanicus str. BPEN, complete genometranscription elongation factor5e-1894
NC_012880:3915500:392881439288143929290477Dickeya dadantii Ech703, complete genometranscription elongation factor GreA5e-1894
NC_013716:4885776:489403748940374894513477Citrobacter rodentium ICC168, complete genometranscription elongation factor6e-1893.6
NC_007759:623116:635172635172635657486Syntrophus aciditrophicus SB, complete genometranscription elongation factor8e-1893.2
NC_015968:4117835:416070141607014161177477Enterobacter asburiae LF7a chromosome, complete genometranscription elongation factor GreA1e-1792.4
NC_005296:4574213:461225246122524612728477Rhodopseudomonas palustris CGA009, complete genometranscription elongation factor GreA3e-1791.3
NC_011004:4947980:496777749677774968253477Rhodopseudomonas palustris TIE-1, complete genometranscription elongation factor GreA3e-1791.3
NC_015318:1151422:117480011748001175270471Hippea maritima DSM 10411 chromosome, complete genometranscription elongation factor GreA1e-1689
NC_004842:1031020:105108510510851051609525Anaplasma marginale str. St. Maries, complete genometranscription elongation factor greA2e-1688.6
NC_009053:1081651:108525610852561085732477Actinobacillus pleuropneumoniae L20, complete genometranscription elongation factor GreA2e-1688.6
NC_010278:1045884:104948910494891049965477Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,transcription elongation factor GreA2e-1688.6
NC_013416:939668:941271941271941747477Aggregatibacter actinomycetemcomitans D11S-1, complete genometranscription elongation factor GreA3e-1688.2
NC_016894:1092005:109614710961471096629483Acetobacterium woodii DSM 1030 chromosome, complete genometranscription elongation factor GreA3e-1687.8
NC_015555:277364:293664293664294137474Thermoanaerobacterium xylanolyticum LX-11 chromosome, completetranscription elongation factor GreA3e-1687.8
NC_014377:149288:156753156753157229477Thermosediminibacter oceani DSM 16646 chromosome, complete genomeGreA/GreB family elongation factor3e-1687.8
NC_014909:86000:108865108865109347483Candidatus Blochmannia vafer str. BVAF chromosome, complete genometranscription elongation factor GreA4e-1687.8
NC_014831:149626:155894155894156373480Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscription elongation factor GreA5e-1687.4
NC_010519:1684901:168490116849011685377477Haemophilus somnus 2336 chromosome, complete genometranscription elongation factor GreA7e-1686.7
NC_004545:392685:406178406178406657480Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genometranscription elongation factor GreA1e-1586.3
NC_016893:563890:568045568045568521477Wigglesworthia glossinidia endosymbiont of Glossina morsitanstranscription elongation factor2e-1585.5
NC_014378:131810:133032133032133505474Acetohalobium arabaticum DSM 5501 chromosome, complete genometranscription elongation factor GreA3e-1584.3
NC_010981:1243888:126900012690001269494495Wolbachia pipientis, complete genometranscription elongation factor GreA5e-1584
NC_009012:3421000:342416634241663424645480Clostridium thermocellum ATCC 27405, complete genometranscription elongation factor GreA8e-1583.2
NC_006833:409599:414560414560415054495Wolbachia endosymbiont strain TRS of Brugia malayi, completeTranscription elongation factor, GreA1e-1482.8
NC_004129:957890:963439963439963915477Pseudomonas fluorescens Pf-5, complete genometranscription elongation factor GreA2e-1482.4
NC_012560:4311906:433028243302824330758477Azotobacter vinelandii DJ, complete genomeProkaryotic transcription elongation factor GreA2e-1482.4
NC_021150:4311902:433027843302784330754477Azotobacter vinelandii CA6, complete genometranscription elongation factor GreA2e-1482.4
NC_015519:245036:247769247769248245477Tepidanaerobacter sp. Re1 chromosome, complete genometranscription elongation factor GreA1e-1482.4
NC_005061:96536:104321104321104809489Candidatus Blochmannia floridanus, complete genometranscription elongation factor, cleaves 3' nucleotide of paused mRNA2e-1482
NC_010320:819326:842047842047842520474Thermoanaerobacter sp. X514 chromosome, complete genometranscription elongation factor GreA2e-1482
NC_014328:4471995:449191744919174492372456Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative transcription elongation factor2e-1482
NC_004344:257471:274883274883275359477Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein3e-1481.6
NC_012416:531772:536755536755537249495Wolbachia sp. wRi, complete genometranscription elongation factor GreA3e-1481.3
NC_014393:4541000:455994645599464560422477Clostridium cellulovorans 743B chromosome, complete genometranscription elongation factor GreA4e-1480.9
NC_015422:2806832:280798628079862808462477Alicycliphilus denitrificans K601 chromosome, complete genometranscription elongation factor GreA4e-1480.9
NC_002978:618723:641759641759642253495Wolbachia endosymbiont of Drosophila melanogaster, complete genometranscription elongation factor GreA5e-1480.9
NC_017259:388000:407534407534408013480Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,transcription elongation factor GreA7e-1480.1
NC_019815:782987:791359791359791835477Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneitranscription elongation factor GreA1e-1379.3
NC_004557:162670:169858169858170418561Clostridium tetani E88, complete genometranscription elongation factor GreA1e-1379
NC_011898:426951:448093448093448569477Clostridium cellulolyticum H10, complete genometranscription elongation factor GreA2e-1378.6
NC_009454:259022:262834262834263310477Pelotomaculum thermopropionicum SI, complete genometranscription elongation factor5e-1377.4
NC_003030:3324834:334348233434823343958477Clostridium acetobutylicum ATCC 824, complete genometranscription elongation factor GreA8e-1376.6
NC_015687:3326461:334510833451083345584477Clostridium acetobutylicum DSM 1731 chromosome, complete genometranscription elongation factor GreA8e-1376.6
NC_015565:173774:179285179285179761477Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completetranscription elongation factor GreA1e-1276.3
NC_007907:225948:234379234379234849471Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1276.3
NC_006368:3028286:305123230512323051714483Legionella pneumophila str. Paris, complete genometranscription elongation factor GreA1e-1275.9
NC_002942:2943206:296397329639732964455483Legionella pneumophila subsp. pneumophila str. Philadelphia 1,transcription elongation factor GreA1e-1275.9
NC_016811:2903871:292463829246382925120483Legionella pneumophila subsp. pneumophila ATCC 43290 chromosome,transcription elongation factor GreA1e-1275.9
NC_015977:3324000:334119633411963341681486Roseburia hominis A2-183 chromosome, complete genometranscription elongation factor GreA1e-1275.9
NC_002528:404545:424946424946425425480Buchnera aphidicola str. APS (Acyrthosiphon pisum), completetranscription elongation factor GreA1e-1275.9
NC_009465:813816:831932831932832411480Candidatus Vesicomyosocius okutanii HA, complete genometranscription elongation factor GreA1e-1275.9
NC_009494:3119997:314076331407633141245483Legionella pneumophila str. Corby chromosome, complete genometranscription elongation factor GreA1e-1275.9
NC_009495:3735703:376226637622663762748483Clostridium botulinum A str. ATCC 3502 chromosome, complete genometranscription elongation factor GreA2e-1275.5
NC_009697:3711692:373825537382553738737483Clostridium botulinum A str. ATCC 19397 chromosome, completetranscription elongation factor GreA2e-1275.5
NC_009698:3609881:363536536353653635847483Clostridium botulinum A str. Hall chromosome, complete genometranscription elongation factor GreA2e-1275.5
NC_007530:4176462:418581541858154186291477Bacillus anthracis str. 'Ames Ancestor', complete genometranscription elongation factor GreA2e-1275.5
NC_005957:4169610:417497241749724175448477Bacillus thuringiensis serovar konkukian str. 97-27, completetranscription elongation factor GreA2e-1275.5
NC_010516:3807780:383327238332723833754483Clostridium botulinum B1 str. Okra, complete genometranscription elongation factor GreA2e-1275.5
NC_009699:3839575:386505338650533865535483Clostridium botulinum F str. Langeland chromosome, complete genometranscription elongation factor GreA2e-1275.5
NC_017297:3838189:386367538636753864157483Clostridium botulinum F str. 230613 chromosome, complete genometranscription elongation factor GreA2e-1275.5
NC_014125:3054000:307473530747353075202468Legionella pneumophila 2300/99 Alcoy chromosome, complete genometranscription elongation factor GreA2e-1275.5
NC_018664:2459994:247645724764572476933477Clostridium acidurici 9a chromosome, complete genometranscription elongation factor GreA2e-1275.1
NC_014960:1735786:178532517853251785792468Anaerolinea thermophila UNI-1, complete genometranscription elongation factor GreA2e-1275.1
NC_011658:4171237:417659341765934177069477Bacillus cereus AH187 chromosome, complete genometranscription elongation factor GreA2e-1275.1
NC_011969:4065460:407195340719534072429477Bacillus cereus Q1 chromosome, complete genometranscription elongation factor grea2e-1275.1
NC_020995:2255521:225885522588552259334480Enterococcus casseliflavus EC20, complete genometranscription elongation factor greA5e-1273.9
NC_012563:4004709:403019040301904030672483Clostridium botulinum A2 str. Kyoto, complete genometranscription elongation factor GreA5e-1273.9
NC_010723:173280:189795189795190277483Clostridium botulinum E3 str. Alaska E43, complete genometranscription elongation factor GreA6e-1273.9
NC_019814:320260:332304332304332780477Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonastranscription elongation factor GreA1e-1173.2
NC_010524:3094303:310650431065043106980477Leptothrix cholodnii SP-6, complete genometranscription elongation factor GreA1e-1172.8
NC_010184:4219257:422221142222114222738528Bacillus weihenstephanensis KBAB4, complete genometranscription elongation factor GreA1e-1172.8
NC_017243:2190000:220210222021022202566465Brachyspira intermedia PWS/A chromosome, complete genometranscription elongation factor GreA2e-1172.4
NC_020291:117983:141165141165141647483Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscription elongation factor GreA2e-1172
NC_009922:490500:505333505333505812480Alkaliphilus oremlandii OhILAs, complete genometranscription elongation factor GreA2e-1172
NC_008262:2649289:268678126867812687257477Clostridium perfringens SM101, complete genometranscription elongation factor GreA2e-1172
NC_014654:2138794:215410021541002154582483Halanaerobium sp. 'sapolanicus' chromosome, complete genometranscription elongation factor GreA2e-1171.6
NC_014335:4113154:411750441175044118031528Bacillus cereus biovar anthracis str. CI chromosome, completetranscription elongation factor3e-1171.6
NC_011146:2200142:220350022035002203976477Geobacter bemidjiensis Bem, complete genometranscription elongation factor GreA3e-1171.6
NC_017200:4191963:419713941971394197666528Bacillus thuringiensis serovar finitimus YBT-020 chromosome,transcription elongation factor GreA4e-1171.2
NC_007503:2098980:212128221212822121755474Carboxydothermus hydrogenoformans Z-2901, complete genometranscription elongation factor GreA4e-1170.9
NC_011772:4321117:432379843237984324325528Bacillus cereus G9842, complete genometranscription elongation factor GreA5e-1170.5
NC_019903:83857:939689396894438471Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,transcription elongation factor GreA5e-1170.5
NC_015425:163000:174106174106174561456Clostridium botulinum BKT015925 chromosome, complete genometranscription elongation factor GreA8e-1170.1
NC_010830:923266:943068943068943541474Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein9e-1169.7
NC_012918:2668031:268448226844822684958477Geobacter sp. M21 chromosome, complete genometranscription elongation factor GreA1e-1069.7
NC_020299:149118:161146161146161622477Candidatus Kinetoplastibacterium oncopeltii TCC290E, completetranscription elongation factor GreA1e-1069.3
NC_008593:153014:163989163989164468480Clostridium novyi NT, complete genometranscription elongation factor greA1e-1068.9
NC_012806:818592:833987833987834472486Mycoplasma conjunctivae, complete genomeTranscription elongation factor4e-1067.4
NC_011025:183287:190603190603191082480Mycoplasma arthritidis 158L3-1, complete genometranscription elongation factor6e-1067
NC_021182:4602683:462331946233194623801483Clostridium pasteurianum BC1, complete genometranscription elongation factor GreA6e-1067
NC_010718:128423:133411133411133905495Natranaerobius thermophilus JW/NM-WN-LF, complete genometranscription elongation factor GreA7e-1066.6
NC_019904:186056:197731197731198204474Echinicola vietnamensis DSM 17526 chromosome, complete genometranscription elongation factor GreA1e-0966.2
NC_016584:85543:914739147391943471Desulfosporosinus orientis DSM 765 chromosome, complete genometranscription elongation factor GreA1e-0966.2
NC_003485:316679:337232337232337762531Streptococcus pyogenes MGAS8232, complete genometranscription elongation factor GreA1e-0965.9
NC_018867:361423:365767365767366237471Dehalobacter sp. CF chromosome, complete genomeTranscription elongation factor GreA3e-0965.1
NC_015738:838715:853221853221853691471Eggerthella sp. YY7918, complete genomehypothetical protein4e-0964.3
NC_008095:3719441:373264237326423733172531Myxococcus xanthus DK 1622, complete genometranscription elongation factor GreB6e-0963.5
NC_009089:4140764:415423441542344154713480Clostridium difficile 630, complete genometranscription elongation factor9e-0963.2
NC_013316:4018451:403255640325564033035480Clostridium difficile R20291, complete genometranscription elongation factor grea9e-0963.2
NC_013124:1606879:160831316083131608795483Acidimicrobium ferrooxidans DSM 10331, complete genomeGreA/GreB family elongation factor3e-0861.2
NC_012997:3185248:320821132082113208729519Teredinibacter turnerae T7901, complete genometranscription elongation factor GreB2e-0758.9
NC_013895:1086500:109919910991991099681483Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completetranscription elongation factor GreA2e-0758.5
NC_002162:333303:348924348924349394471Ureaplasma parvum serovar 3 str. ATCC 700970, complete genometranscription elongation factor3e-0757.8
NC_006370:166000:187189187189187659471Photobacterium profundum SS9 chromosome 1, complete sequencetranscription elongation factor GreB5e-0757.4
NC_017271:3057161:306004130600413060547507Xanthomonas campestris pv. raphani 756C chromosome, completetranscription elongation factor GreB6e-0757
NC_008752:3955327:395767839576783958244567Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscription elongation factor GreB8e-0756.6
UCMB5137:2054735:210279621027962103260465Bacillus atrophaeus UCMB-5137transcription elongation factor GreA1e-0656.2
NC_012590:1004816:101846810184681018989522Corynebacterium aurimucosum ATCC 700975, complete genomeTranscription elongation factor1e-0656.2
NC_012704:652589:673314673314673820507Corynebacterium kroppenstedtii DSM 44385, complete genomeTranscription elongation factor2e-0655.5
NC_009654:4253431:425643942564394257029591Marinomonas sp. MWYL1, complete genometranscription elongation factor GreB5e-0653.9