Pre_GI: BLASTP Hits

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Query: NC_008530:469802:476682 Lactobacillus gasseri ATCC 33323, complete genome

Start: 476682, End: 477047, Length: 366

Host Lineage: Lactobacillus gasseri; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Lactobacillus gasseri ATCC 33323 is a human isolate and is the type strain. This organism has been shown to have probiotic activities such as production of bacteriocins, macrophage stimulation and adherence to intestinal tissues. Normal gastrointestinal bacterium. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus gasseri is a rod-shaped, gram-positive anaerobe. Of the lactobacilli, it is the most amenable to DNA introduction and manipulation which should prove useful in the functional genomic analysis of this species. It has been shown to be an effective probiotic in suppressing Helicobacter pylori infections in humans.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005362:550823:557693557693558064372Lactobacillus johnsonii NCC 533, complete genomehypothetical protein5e-60229
NC_013504:447891:454761454761455132372Lactobacillus johnsonii FI9785 chromosome, complete genomeRNA binding protein1e-58224
NC_013198:813830:822055822055822438384Lactobacillus rhamnosus GG, complete genomepolyribonucleotide nucleotidyltransferase (general stress protein 13) (RNA binding protein (S1 domain)5e-24109
NC_008526:817628:822913822913823296384Lactobacillus casei ATCC 334, complete genomeRNA binding protein (S1 domain)4e-24109
NC_010999:880878:885510885510885893384Lactobacillus casei, complete genomeRNA binding protein (S1 domain)4e-24109
NC_014334:769205:774490774490774873384Lactobacillus casei str. Zhang chromosome, complete genomeRNA binding protein (S1 domain)4e-24109
NC_015428:823420:828734828734829114381Lactobacillus buchneri NRRL B-30929 chromosome, complete genomeRNA binding S1 domain-containing protein6e-23106
NC_007929:473500:479626479626480036411Lactobacillus salivarius subsp. salivarius UCC118, complete genomePolyribonucleotide nucleotidyltransferase1e-22105
NC_013199:811929:816629816629816988360Lactobacillus rhamnosus Lc 705, complete genomepolyribonucleotide nucleotidyltransferase (general stress protein 13), RNA binding protein (S1 domain)7e-2199
NC_015975:1493636:150951715095171509900384Lactobacillus ruminis ATCC 27782 chromosome, complete genomeRNA Binding protein3e-2097.1
NC_004668:2762464:277451027745102774878369Enterococcus faecalis V583, complete genomegeneral stress protein 13, putative5e-2096.3
NC_017208:4845281:486543648654364865780345Bacillus thuringiensis serovar chinensis CT-43 chromosome, completegeneral stress protein 132e-1684.7
NC_014171:4708282:472937547293754729719345Bacillus thuringiensis BMB171 chromosome, complete genomegeneral stress protein 132e-1684.3
NC_016605:272231:273161273161273598438Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeS1 RNA binding domain-containing protein1e-1272
NC_014761:74500:7450274502762951794Oceanithermus profundus DSM 14977 chromosome, complete genomeSSU ribosomal protein s1p1e-1168.6
NC_014377:112992:114171114171114548378Thermosediminibacter oceani DSM 16646 chromosome, complete genomeRNA binding S1 domain protein2e-1064.3
NC_008262:2649289:269913026991302699534405Clostridium perfringens SM101, complete genomeRNA-binding protein5e-1063.2
NC_015978:412856:413650413650414093444Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeprotein YabR6e-1062.8
NC_009922:2850320:285812428581242858552429Alkaliphilus oremlandii OhILAs, complete genomeRNA binding S1 domain protein8e-1062.4
NC_016605:766836:773361773361773744384Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeRNA binding protein (S1 domain)1e-0962
NC_010516:3845942:384617338461733846577405Clostridium botulinum B1 str. Okra, complete genomeputative general stress protein1e-0962
NC_009698:3647955:364826536482653648669405Clostridium botulinum A str. Hall chromosome, complete genomehypothetical protein1e-0962
NC_009699:3839575:387782638778263878230405Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein1e-0962
NC_013124:1107202:1121926112192611232091284Acidimicrobium ferrooxidans DSM 10331, complete genomeRNA binding S1 domain protein3e-0960.5
NC_016641:1639356:165197816519781652502525Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein3e-0960.5
NC_014483:39729:532965329653820525Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein4e-0960.1
NC_012469:1403412:140305114030511403437387Streptococcus pneumoniae Taiwan19F-14, complete genomeS1-type RNA-binding domain protein5e-0959.7
NC_012468:1453763:145340214534021453788387Streptococcus pneumoniae 70585, complete genomehypothetical protein6e-0959.7
NC_003098:1372875:137251413725141372900387Streptococcus pneumoniae R6, complete genomehypothetical protein6e-0959.7
NC_012466:1367099:136673813667381367124387Streptococcus pneumoniae JJA, complete genomeS1-type RNA-binding domain protein6e-0959.7
NC_011900:1451545:145487414548741455233360Streptococcus pneumoniae ATCC 700669, complete genomehypothetical protein7e-0959.3
NC_011899:1603500:1613638161363816147681131Halothermothrix orenii H 168, complete genomeCRISPR-associated RAMP protein, Cmr6 family9e-0958.9
NC_007513:1126914:1126914112691411292682355Synechococcus sp. CC9902, complete genomeRNA binding S19e-0958.9
NC_015519:197836:200036200036200431396Tepidanaerobacter sp. Re1 chromosome, complete genomeRNA binding S1 domain-containing protein1e-0858.9
NC_008525:1202852:121582812158281216202375Pediococcus pentosaceus ATCC 25745, complete genomeRNA binding protein (S1 domain)1e-0858.5
NC_009633:168266:188282188282188698417Alkaliphilus metalliredigens QYMF chromosome, complete genomeRNA-binding S1 domain-containing protein2e-0858.2
NC_013595:3952196:395891139589113959795885Streptosporangium roseum DSM 43021, complete genome30S ribosomal protein S13e-0857.4
NC_013161:3071105:308227030822703083265996Cyanothece sp. PCC 8802, complete genomeRNA binding S1 domain protein5e-0856.6
NC_011726:3205278:321467932146793215674996Cyanothece sp. PCC 8801, complete genomeRNA binding S1 domain protein5e-0856.6
NC_007929:1397989:142012614201261420590465Lactobacillus salivarius subsp. salivarius UCC118, complete genomeS1-type RNA-binding domain5e-0856.6
NC_012704:947409:9626289626289640941467Corynebacterium kroppenstedtii DSM 44385, complete genome30S ribosomal protein S15e-0856.6
NC_007498:1072112:1072112107211210743912280Pelobacter carbinolicus DSM 2380, complete genometranscriptional accessory protein6e-0856.2
NC_016582:9459566:9459566945956694610681503Streptomyces bingchenggensis BCW-1 chromosome, complete genome30S ribosomal protein S16e-0856.2
NC_013192:374000:3741753741753759771803Leptotrichia buccalis DSM 1135, complete genomeRNA binding S1 domain protein6e-0856.2
NC_011999:2023248:204089120408912041277387Macrococcus caseolyticus JCSC5402, complete genomehypothetical protein7e-0855.8
NC_007576:1564739:158547815854781585939462Lactobacillus sakei subsp. sakei 23K, complete genomePutative RNA-binding protein9e-0855.8
NC_008319:478499:513071513071513988918Synechococcus sp. CC9311, complete genomeribosomal protein S11e-0755.5
NC_013740:1081454:1101239110123911037102472Acidaminococcus fermentans DSM 20731, complete genomeribonuclease R1e-0755.5
NC_004369:1525787:1525787152578715272441458Corynebacterium efficiens YS-314, complete genome30S ribosomal protein S11e-0755.5
NC_017316:203233:204344204344204823480Enterococcus faecalis OG1RF chromosome, complete genomeS1 RNA-binding domain protein2e-0754.7
NC_019892:3086493:3106774310677431085821809Singulisphaera acidiphila DSM 18658 chromosome, complete genome30S ribosomal protein S12e-0754.7
NC_012121:139741:161738161738162148411Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative RNA binding protein with S1 domain2e-0754.7
NC_008312:7169309:7170231717023171714031173Trichodesmium erythraeum IMS101, complete genomeRNA binding S12e-0754.3
NC_010723:173280:176802176802177218417Clostridium botulinum E3 str. Alaska E43, complete genomeRNA-binding protein2e-0754.3
NC_016630:1385719:1387649138764913888331185Filifactor alocis ATCC 35896 chromosome, complete genomehypothetical protein2e-0754.3
NC_008261:2157713:2171507217150721736152109Clostridium perfringens ATCC 13124, complete genomepolyribonucleotide nucleotidyltransferase3e-0753.9
NC_013407:1177731:118038711803871181178792Methanocaldococcus vulcanius M7, complete genometranslation initiation factor 2, alpha subunit3e-0753.9
NC_016024:156000:1666771666771683651689Candidatus Chloracidobacterium thermophilum B chromosome chromosome30S ribosomal protein S1P3e-0753.9
NC_014643:1986440:2032090203209020335501461Rothia dentocariosa ATCC 17931 chromosome, complete genome30S ribosomal protein S14e-0753.5
NC_009634:1002295:102349010234901024287798Methanococcus vannielii SB chromosome, complete genometranslation initiation factor IF-2 subunit alpha5e-0753.1
NC_012483:996555:9965559965559988162262Acidobacterium capsulatum ATCC 51196, complete genomeS1 RNA binding domain protein5e-0753.1
NC_020291:117983:128773128773129183411Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRNA-binding S1 domain-containing protein6e-0753.1
NC_014410:2149886:2158283215828321604212139Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,Tex-like protein protein-like protein7e-0752.8
NC_019970:2190695:2202095220209522042332139Thermoanaerobacterium thermosaccharolyticum M0795, complete genometranscriptional accessory protein7e-0752.8
NC_014830:1871135:1888678188867818901591482Intrasporangium calvum DSM 43043 chromosome, complete genomeSSU ribosomal protein S1P7e-0752.8
NC_009674:2551759:2554152255415225562842133Bacillus cytotoxicus NVH 391-98 chromosome, complete genomepolynucleotide phosphorylase/polyadenylase7e-0752.8
NC_008262:1835613:1845555184555518476632109Clostridium perfringens SM101, complete genomepolyribonucleotide nucleotidyltransferase6e-0752.8
NC_004344:257471:2611582611582632752118Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein9e-0752.4
NC_015681:1685672:1705096170509617072222127Thermodesulfatator indicus DSM 15286 chromosome, complete genomepolyribonucleotide nucleotidyltransferase1e-0652.4
NC_011565:620801:6561786561786583372160Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,polynucleotide phosphorylase/polyadenylase1e-0652
NC_009637:920423:940904940904941701798Methanococcus maripaludis C7 chromosome, complete genometranslation initiation factor IF-2 subunit alpha2e-0651.6
NC_008011:924392:9412719412719429951725Lawsonia intracellularis PHE/MN1-00, complete genomeribosomal protein S12e-0651.6
NC_015389:1375315:1408343140834314096111269Coriobacterium glomerans PW2 chromosome, complete genomeSSU ribosomal protein S1P2e-0651.6
NC_007354:845500:8668588668588685611704Ehrlichia canis str. Jake, complete genomeRNA binding S12e-0651.6
NC_011296:1750771:1750771175077117529032133Thermodesulfovibrio yellowstonii DSM 11347, complete genomepolyribonucleotide nucleotidyltransferase1e-0651.6
NC_014098:1553900:1557270155727015594532184Bacillus tusciae DSM 2912 chromosome, complete genomepolyribonucleotide nucleotidyltransferase1e-0651.6
NC_007799:392355:3932353932353949381704Ehrlichia chaffeensis str. Arkansas, complete genomeputative ribosomal protein S11e-0651.6
NC_009511:2726296:2726296272629627280051710Sphingomonas wittichii RW1 chromosome, complete genome30S ribosomal protein S11e-0651.6
NC_003551:390268:394890394890395693804Methanopyrus kandleri AV19, complete genometranslation initiation factor IF-2 alpha subunit2e-0651.2
NC_014039:869826:8709278709278724231497Propionibacterium acnes SK137 chromosome, complete genome30S ribosomal protein S12e-0651.2
NC_006085:854500:8545978545978560931497Propionibacterium acnes KPA171202, complete genome30S ribosomal protein S12e-0651.2
NC_016511:844500:8445618445618460571497Propionibacterium acnes TypeIA2 P.acn31 chromosome, complete30S ribosomal protein S12e-0651.2
NC_016512:843938:8439388439388454341497Propionibacterium acnes TypeIA2 P.acn17 chromosome, complete30S ribosomal protein S12e-0651.2
NC_016516:834260:8353618353618368571497Propionibacterium acnes TypeIA2 P.acn33 chromosome, complete30S ribosomal protein S12e-0651.2
NC_016632:1138000:1150452115045211521371686Serratia symbiotica str. 'Cinara cedri' chromosome, complete30S ribosomal protein S12e-0651.2
NC_021182:2667408:2686002268600226879271926Clostridium pasteurianum BC1, complete genome(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase2e-0651.2
NC_013741:27353:386833868339504822Archaeoglobus profundus DSM 5631, complete genometranslation initiation factor 2, alpha subunit2e-0651.2
NC_017208:3816753:3819521381952138216592139Bacillus thuringiensis serovar chinensis CT-43 chromosome, completepolynucleotide phosphorylase/polyadenylase2e-0650.8
NC_007530:3616828:3619585361958536217232139Bacillus anthracis str. 'Ames Ancestor', complete genomepolyribonucleotide nucleotidyltransferase2e-0650.8
NC_003909:3587695:3592189359218935943272139Bacillus cereus ATCC 10987, complete genomepolyribonucleotide nucleotidyltransferase2e-0650.8
NC_005945:3615623:3620153362015336222912139Bacillus anthracis str. Sterne, complete genomepolyribonucleotide nucleotidyltransferase2e-0650.8
NC_003997:3617000:3619458361945836215962139Bacillus anthracis str. Ames, complete genomepolyribonucleotide nucleotidyltransferase2e-0650.8
NC_012659:3617000:3619485361948536216232139Bacillus anthracis str. A0248, complete genomepolynucleotide phosphorylase/polyadenylase2e-0650.8
NC_011725:3821789:3824171382417138263092139Bacillus cereus B4264 chromosome, complete genomepolynucleotide phosphorylase2e-0650.8
NC_011772:3787500:3789887378988737920252139Bacillus cereus G9842, complete genomepolyribonucleotide nucleotidyltransferase2e-0650.8
NC_008601:168063:1727671727671744371671Francisella tularensis subsp. novicida U112, complete genome30S ribosomal protein S13e-0650.8
NC_008369:1830442:1844220184422018459441725Francisella tularensis subsp. holarctica OSU18, complete genomeribosomal protein S13e-0650.8
NC_011773:3651963:3654342365434236564802139Bacillus cereus AH820 chromosome, complete genomepolynucleotide phosphorylase/polyadenylase3e-0650.8
NC_013595:3541012:354689635468963547732837Streptosporangium roseum DSM 43021, complete genome30S ribosomal protein S13e-0650.8
NC_009749:1825453:1839283183928318409531671Francisella tularensis subsp. holarctica FTA, complete genomeribosomal protein S13e-0650.8
NC_007880:1830803:1844633184463318463031671Francisella tularensis subsp. holarctica, complete genome30S ribosomal protein S13e-0650.8
NC_014335:3567931:3570310357031035724482139Bacillus cereus biovar anthracis str. CI chromosome, completepolyribonucleotide nucleotidyltransferase2e-0650.8
NC_005957:3638750:3641129364112936432672139Bacillus thuringiensis serovar konkukian str. 97-27, completepolyribonucleotide nucleotidyltransferase2e-0650.8
NC_015589:2999735:3014541301454130165562016Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehydroxymethylbutenyl pyrophosphate reductase2e-0650.8
NC_016779:3579743:3582122358212235842602139Bacillus cereus F837/76 chromosome, complete genomePolyribonucleotide nucleotidyltransferase2e-0650.8
NC_014171:3701051:3703431370343137055692139Bacillus thuringiensis BMB171 chromosome, complete genomepolynucleotide phosphorylase/polyadenylase2e-0650.8
NC_004722:3777907:3780286378028637824242139Bacillus cereus ATCC 14579, complete genomePolyribonucleotide nucleotidyltransferase2e-0650.8
NC_015847:1712023:173196217319621732759798Methanococcus maripaludis XI chromosome, complete genometranslation initiation factor IF-2 subunit alpha2e-0650.8
NC_005791:1626448:164640116464011647198798Methanococcus maripaludis S2, complete genometranslation initiation factor IF-2 alpha subunit2e-0650.8
NC_020195:285606:2989942989943008141821Blattabacterium sp. (Blatta orientalis) str. Tarazona, completesmall subunit ribosomal protein S12e-0650.8
NC_017200:3655496:3661188366118836633262139Bacillus thuringiensis serovar finitimus YBT-020 chromosome,polynucleotide phosphorylase/polyadenylase2e-0650.8
NC_006274:3697255:3700012370001237021502139Bacillus cereus E33L, complete genomepolyribonucleotide nucleotidyltransferase2e-0650.8
NC_012472:3661912:3664291366429136664292139Bacillus cereus 03BB102, complete genomepolyribonucleotide nucleotidyltransferase2e-0650.8
NC_008600:3643905:3646284364628436484222139Bacillus thuringiensis str. Al Hakam, complete genomepolyribonucleotide nucleotidyltransferase2e-0650.8
NC_011658:3603009:3607502360750236096402139Bacillus cereus AH187 chromosome, complete genomepolynucleotide phosphorylase/polyadenylase2e-0650.8
NC_011969:3549000:3551464355146435536022139Bacillus cereus Q1 chromosome, complete genomepolynucleotide phosphorylase/polyadenylase2e-0650.8
NC_016771:3555506:3559999355999935621372139Bacillus cereus NC7401, complete genomepolyribonucleotide nucleotidyltransferase2e-0650.8
NC_019970:1343670:1345755134575513478572103Thermoanaerobacterium thermosaccharolyticum M0795, complete genomepolyribonucleotide nucleotidyltransferase4e-0650.4
NC_012032:3281869:3300427330042733016261200Chloroflexus sp. Y-400-fl, complete genomeRNA binding S1 domain protein4e-0650.4
NC_010175:3287500:3305410330541033066091200Chloroflexus aurantiacus J-10-fl, complete genomeRNA binding S1 domain protein4e-0650.4
NC_020291:5808856:5812115581211558132721158Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH3e-0650.4
NC_012968:1108687:1132872113287211353792508Methylotenera mobilis JLW8, complete genomeribonuclease R3e-0650.4
NC_015558:905227:9291469291469303781233Streptococcus parauberis KCTC 11537 chromosome, complete genome30S ribosomal protein S13e-0650.4
NC_015711:6522808:6561439656143965631511713Myxococcus fulvus HW-1 chromosome, complete genome30S ribosomal protein S13e-0650.4
NC_005071:835005:8350058350058373982394Prochlorococcus marinus str. MIT 9313, complete genomeputative acetazolamide conferring resistance protein Zam3e-0650.4
NC_015672:1921023:1960212196021219619331722Flexistipes sinusarabici DSM 4947 chromosome, complete genomeRNA binding S1 domain-containing protein5e-0650.1
NC_017512:2161000:2176889217688921791622274Neisseria meningitidis WUE 2594, complete genomeputative RNA-binding protein5e-0650.1
NC_010184:3675424:3678190367819036803432154Bacillus weihenstephanensis KBAB4, complete genomePolyribonucleotide nucleotidyltransferase5e-0650.1
NC_017515:76861:7823178231805042274Neisseria meningitidis M04-240196 chromosome, complete genomeS1 RNA binding domain-containing protein5e-0650.1
NC_012997:1446037:1446037144603714477191683Teredinibacter turnerae T7901, complete genomeribosomal protein S16e-0649.7
NC_014122:606000:610454610454611242789Methanocaldococcus infernus ME chromosome, complete genometranslation initiation factor 2, alpha subunit6e-0649.7
NC_011146:3720658:3746037374603737477911755Geobacter bemidjiensis Bem, complete genomeribosomal protein S15e-0649.7
NC_012918:1174412:1175332117533211770861755Geobacter sp. M21 chromosome, complete genome30S ribosomal protein S15e-0649.7
NC_015577:3589884:3610418361041836128502433Treponema azotonutricium ZAS-9 chromosome, complete genometranscriptional accessory protein7e-0649.3
NC_014632:1404000:1406189140618914083392151Ilyobacter polytropus DSM 2926 chromosome, complete genomepolyribonucleotide nucleotidyltransferase8e-0649.3
NC_015379:1887275:1892538189253818942261689Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,30S ribosomal protein S18e-0649.3
NC_020209:997385:1002646100264610043371692Pseudomonas poae RE*1-1-14, complete genome30S ribosomal protein S19e-0648.9
NC_011770:2046490:2053040205304020547191680Pseudomonas aeruginosa LESB58, complete genome30S ribosomal protein S19e-0648.9
NC_008463:2017607:2024157202415720258361680Pseudomonas aeruginosa UCBPP-PA14, complete genome30S ribosomal protein S19e-0648.9
NC_009656:1994392:2000957200095720026361680Pseudomonas aeruginosa PA7 chromosome, complete genome30S ribosomal protein S19e-0648.9
NC_016830:1901488:1906751190675119084451695Pseudomonas fluorescens F113 chromosome, complete genomeprotein RpsA9e-0648.9
NC_018080:1834754:1841304184130418429831680Pseudomonas aeruginosa DK2 chromosome, complete genome30S ribosomal protein S19e-0648.9
NC_004129:4993974:5007077500707750087711695Pseudomonas fluorescens Pf-5, complete genome30S ribosomal protein S18e-0648.9
NC_012660:1804610:1810957181095718126481692Pseudomonas fluorescens SBW25 chromosome, complete genome30S ribosomal protein S19e-0648.9