Pre_GI Gene

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Host: NC_012660 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012660:1804610 Pseudomonas fluorescens SBW25 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
180461018056951086phosphoserine aminotransferaseQuickGO ontologyBLASTP
180569518067891095chorismate mutaseprephenate dehydrataseQuickGO ontologyBLASTP
180679918079111113histidinol-phosphate aminotransferaseQuickGO ontologyBLASTP
180790418101502247bifunctional cyclohexadienyl dehydrogenase 3-phosphoshikimate 1-carboxyvinyltransferaseQuickGO ontologyBLASTP
18101471810836690cytidylate kinaseQuickGO ontologyBLASTP
18109571812648169230S ribosomal protein S1QuickGO ontologyBLASTP
18128111813095285putative lipoproteinQuickGO ontologyBLASTP
18132281813524297integration host factor subunit betaQuickGO ontologyBLASTP
18135501813789240hypothetical proteinBLASTP
181477618159541179putative transporter-like membrane proteinQuickGO ontologyBLASTP
18159541816760807hypothetical proteinBLASTP
181676318179861224hypothetical proteinBLASTP
181803718193051269hypothetical protein
181936018203941035polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
182039818215251128NAD dependent epimerasedehydrataseQuickGO ontologyBLASTP
182153818226681131UDP-N-acetylglucosamine2-epimeraseQuickGO ontologyBLASTP
182267418238911218putative glycosyltransferaseQuickGO ontologyBLASTP
18240951824682588BLASTP
182508518261161032putative Rieske domain hypothetical proteinQuickGO ontologyBLASTP
182616818272501083putative 3-oxoacyl-acyl-carrier-protein synthase IIIQuickGO ontologyBLASTP
18272471828008762putative dehydrogenaseQuickGO ontologyBLASTP
18280051828670666putative transferaseQuickGO ontologyBLASTP
182867418296901017putative 3-oxoacyl-Acyl-carrier-protein synthase IIIQuickGO ontologyBLASTP
182973918309171179putative aminotransferaseQuickGO ontologyBLASTP
183131018333041995putative polysaccharide biosynthesis-related membrane proteinQuickGO ontologyBLASTP
18333971833747351hypothetical proteinBLASTP
18337691834347579putative TetR family regulatory proteinQuickGO ontologyBLASTP
18344561835124669putative GntR family regulatory proteinQuickGO ontologyBLASTP