Pre_GI: OUP Neighbours

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Query: NC_012660:1804610 Pseudomonas fluorescens SBW25 chromosome, complete genome

D: 54.2743

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.

Number of Neighbours: 7




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_015379:1887275*Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,76.5012 %Subject Query31.0848
NC_012880:3915500*Dickeya dadantii Ech703, complete genome78.4191 %Subject Query32.55
NC_009138:1138917Herminiimonas arsenicoxydans, complete genome76.1366 %Subject Query34.358
NC_007645:2181739*Hahella chejuensis KCTC 2396, complete genome76.1274 %Subject Query37.3602
NC_014394:3036758Gallionella capsiferriformans ES-2 chromosome, complete genome76.3817 %Subject Query37.5243
NC_015410:2144387*Pseudomonas mendocina NK-01 chromosome, complete genome76.8045 %Subject Query41.6723
NC_015738:1768951Eggerthella sp. YY7918, complete genome75.1593 %Subject ←→ Query47.2794