Pre_GI Gene

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Host: NC_012483 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012483:996555 Acidobacterium capsulatum ATCC 51196, complete genome

Host Lineage: Acidobacterium capsulatum; Acidobacterium; Acidobacteriaceae; Acidobacteriales; Acidobacteria; Bacteria

General Information: Isolated from acidic mine drainage in Yanahara mine, Okayama, Japan. Acidophilic bacterium. This genus comprises a number of species commonly found in water reservoirs, microbial mats, many different soil types, marine and freshwater sediments, as well as in hot-spring mats and sediments, etc. Furthermore, they sometimes form the dominant group in a habitat. These bacteria are involved in the first step of destruction of biologically complex molecules produced by autotrophic (capable of synthesizing their own nutrients) microorganisms. Acidobacterium capsulatum is an aerobic, mesophilic, chemo-organotroph able to use a variety of carbon sources and to grow up to pH 6.0. The species comprises several strains characterized by orange pigmentation, production of menoquinones as their sole quinones, and branched-chain iso fatty acids as their cell envelope components.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
9965559988162262S1 RNA binding domain proteinQuickGO ontologyBLASTP
99897910010782100beta-galactosidaseQuickGO ontologyBLASTP
10010801001244165hypothetical protein
100127510026841410alpha-L-fucosidaseQuickGO ontologyBLASTP
100284610061183273putative lipoproteinQuickGO ontologyBLASTP
100669510082211527hypothetical proteinBLASTP
100866510124623798hypothetical proteinBLASTP
10121841012558375hypothetical protein
101261610145531938ricin-type beta-trefoil lectin domain proteinQuickGO ontologyBLASTP
101460510172412637ABC transporter permease proteinQuickGO ontologyBLASTP
10172381017600363transcriptional regulator PadR familyQuickGO ontologyBLASTP
10177811018686906pseudouridine synthase RluA familyQuickGO ontologyBLASTP
10191061019252147hypothetical protein
101923710216842448alpha-xylosidaseQuickGO ontologyBLASTP
102182910252933465hypothetical proteinBLASTP
102570210270541353hypothetical proteinBLASTP
10266681027171504hypothetical protein
102726410287331470TPR domain proteinQuickGO ontologyBLASTP
10288881029535648hypothetical protein
10299031030826924farnesyltranstransferaseQuickGO ontologyBLASTP
103082310319351113ABC transporter permease proteinQuickGO ontologyBLASTP
10319281032629702ABC transporter lipoprotein translocase LPT family ATP-binding proteinQuickGO ontologyBLASTP
103262610339901365hypothetical protein
10339901034403414hypothetical protein
10342511034469219hypothetical protein
103438710363121926cytochrome C family proteinQuickGO ontologyBLASTP