Pre_GI Gene

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Host: NC_011770 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011770:2046490 Pseudomonas aeruginosa LESB58, complete genome

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2046490204757510863-phosphoserine aminotransferaseQuickGO ontologyBLASTP
204757520486721098chorismate mutaseQuickGO ontologyBLASTP
204874120498501110histidinol-phosphate aminotransferaseQuickGO ontologyBLASTP
204984320520832241still frameshift 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE prephenate dehydrogenaseQuickGO ontologyBLASTP
20520832052772690cytidylate kinaseQuickGO ontologyBLASTP
20530402054719168030S ribosomal protein S1QuickGO ontologyBLASTP
20548562055140285integration host factor beta subunitQuickGO ontologyBLASTP
205586820568691002O-antigen chain length regulatorQuickGO ontologyBLASTP
205697920582471269UDP-glucoseGDP-mannose dehydrogenase-like proteinQuickGO ontologyBLASTP
205828820593101023wbpPQuickGO ontologyBLASTP
205951020609341425hypothetical proteinBLASTP
206105620621021047WbpRQuickGO ontologyBLASTP
206210720639901884ORF_10 similar to Asparagine synthaseQuickGO ontologyBLASTP
206398720651381152ORF_11 similar to Glycosyl transferases group 1QuickGO ontologyBLASTP
206518220663121131ORF_12 similar to Glycosyl transferases group 1QuickGO ontologyBLASTP
20665432067271729ORF_13 similar to NAD dependent epimerasedehydratase familyQuickGO ontologyBLASTP
206726820683081041putative group 4 glycosyl transferaseQuickGO ontologyBLASTP
206850620705031998nucleotide sugar epimerasedehydratase WbpMQuickGO ontologyBLASTP