Pre_GI: OUP Neighbours

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Query: NC_011741:256932 Escherichia coli IAI1 chromosome, complete genome

D: 34.5956

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from the faeces of a young healthy military conscript in the 1980s in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

Number of Neighbours: 154




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_005810:4469156Yersinia pestis biovar Microtus str. 91001, complete genome76.0754 %Subject ←→ Query29.5112
NC_008149:4053363Yersinia pestis Nepal516, complete genome76.3358 %Subject ←→ Query30.0006
NC_004088:266543Yersinia pestis KIM, complete genome76.3388 %Subject ←→ Query30.0081
NC_011745:1055354*Escherichia coli ED1a chromosome, complete genome75.9773 %Subject ←→ Query30.2164
NC_016863:2721826Salmonella enterica subsp. enterica serovar Typhimurium str. UK-177.6685 %Subject ←→ Query30.7584
NC_013941:5317424Escherichia coli O55:H7 str. CB9615 chromosome, complete genome77.6869 %Subject ←→ Query30.8609
NC_011745:2025725Escherichia coli ED1a chromosome, complete genome77.2365 %Subject ←→ Query31.1649
NC_016612:4823529Klebsiella oxytoca KCTC 1686 chromosome, complete genome75.9926 %Subject ←→ Query31.3367
NC_016810:2719779Salmonella enterica subsp. enterica serovar Typhimurium str77.5368 %Subject ←→ Query31.43
NC_016857:2719779Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/7477.4908 %Subject ←→ Query31.43
NC_013971:666730Erwinia amylovora ATCC 49946 chromosome, complete genome78.367 %Subject ←→ Query31.4537
NC_016856:2773995Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S77.7941 %Subject ←→ Query31.5078
NC_008563:3119284Escherichia coli APEC O1, complete genome80.7537 %Subject ←→ Query31.9127
NC_011742:4962008Escherichia coli S88 chromosome, complete genome77.6777 %Subject ←→ Query32.4611
NC_015737:2050219Clostridium sp. SY8519, complete genome75.7292 %Subject ←→ Query32.545
NC_013353:2134556*Escherichia coli O103:H2 str. 12009, complete genome80.1226 %Subject ←→ Query32.8216
NC_013892:274297Xenorhabdus bovienii SS-2004 chromosome, complete genome77.3897 %Subject ←→ Query32.8965
NC_013941:1014386Escherichia coli O55:H7 str. CB9615 chromosome, complete genome79.2402 %Subject ←→ Query33.1965
NC_011283:942594Klebsiella pneumoniae 342 chromosome, complete genome76.7402 %Subject ←→ Query33.3475
NC_007384:1763375Shigella sonnei Ss046, complete genome85.5668 %Subject ←→ Query33.4012
NC_016860:2323017*Salmonella enterica subsp. enterica serovar Typhimurium str75.3156 %Subject ←→ Query33.5197
NC_016810:2325190*Salmonella enterica subsp. enterica serovar Typhimurium str75.2941 %Subject ←→ Query33.5449
NC_016857:2325190*Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/7475.2941 %Subject ←→ Query33.5449
NC_016856:2379027*Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S75.2237 %Subject ←→ Query33.6556
NC_011353:921500Escherichia coli O157:H7 str. EC4115 chromosome, complete genome79.3015 %Subject ←→ Query34.5194
CU928160:256932Escherichia coli IAI1 chromosome, complete genome100 %Subject ←→ Query34.5956
NC_013892:753307Xenorhabdus bovienii SS-2004 chromosome, complete genome75.5944 %Subject ←→ Query34.8067
NC_013364:2522888Escherichia coli O111:H- str. 11128, complete genome81.0846 %Subject ←→ Query34.9313
NC_017046:2324554*Salmonella enterica subsp. enterica serovar Typhimurium str. 79875.2849 %Subject ←→ Query35.0182
NC_014618:4312295*Enterobacter cloacae SCF1 chromosome, complete genome75.8211 %Subject ←→ Query35.071
NC_013008:918215Escherichia coli O157:H7 str. TW14359 chromosome, complete genome80.6801 %Subject ←→ Query35.1897
NC_011353:2892265Escherichia coli O157:H7 str. EC4115 chromosome, complete genome76.7188 %Subject ←→ Query35.2611
NC_016831:1865681Salmonella enterica subsp. enterica serovar Gallinarum/pullorum84.3903 %Subject ←→ Query35.6576
NC_011601:756885Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome79.4455 %Subject ←→ Query35.8585
NC_013364:3312379Escherichia coli O111:H- str. 11128, complete genome77.8125 %Subject ←→ Query36.0044
NC_011094:4442478Salmonella enterica subsp. enterica serovar Schwarzengrund str75.2237 %Subject ←→ Query36.096
NC_013941:2425233Escherichia coli O55:H7 str. CB9615 chromosome, complete genome79.6017 %Subject ←→ Query36.1047
NC_011601:1077548Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome79.1605 %Subject ←→ Query36.1989
NC_013961:3083816Erwinia amylovora, complete genome78.8113 %Subject ←→ Query36.2172
NC_007608:97092Shigella boydii Sb227 plasmid pSB4_227, complete sequence75.576 %Subject ←→ Query36.3239
NC_009801:3374501*Escherichia coli E24377A, complete genome76.5502 %Subject ←→ Query36.3653
NC_016845:3238507*Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,75.9436 %Subject ←→ Query36.3698
NC_004431:1352906Escherichia coli CFT073, complete genome79.1759 %Subject ←→ Query36.4239
NC_002695:2158314Escherichia coli O157:H7 str. Sakai, complete genome78.8419 %Subject ←→ Query36.4725
NC_016612:5600177Klebsiella oxytoca KCTC 1686 chromosome, complete genome76.5533 %Subject ←→ Query36.4903
AP010958:1472506Escherichia coli O103:H2 str. 12009 DNA, complete genome80.9283 %Subject ←→ Query36.7127
NC_013353:1472506Escherichia coli O103:H2 str. 12009, complete genome80.9283 %Subject ←→ Query36.7127
NC_011751:1377457Escherichia coli UMN026 chromosome, complete genome78.9859 %Subject ←→ Query36.813
NC_011094:638552Salmonella enterica subsp. enterica serovar Schwarzengrund str78.3793 %Subject ←→ Query36.8525
NC_011353:1195179*Escherichia coli O157:H7 str. EC4115 chromosome, complete genome76.0049 %Subject ←→ Query36.9832
NC_013941:1963523Escherichia coli O55:H7 str. CB9615 chromosome, complete genome78.3364 %Subject ←→ Query36.9893
NC_013364:863209Escherichia coli O111:H- str. 11128, complete genome80.9069 %Subject ←→ Query37.1558
NC_013008:2889743Escherichia coli O157:H7 str. TW14359 chromosome, complete genome77.2917 %Subject ←→ Query37.196
NC_002695:2893951Escherichia coli O157:H7 str. Sakai, complete genome77.1017 %Subject ←→ Query37.275
NC_009648:3476000Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome78.4222 %Subject ←→ Query37.4593
NC_011750:1931384Escherichia coli IAI39 chromosome, complete genome77.8309 %Subject ←→ Query37.6581
NC_013361:2169948Escherichia coli O26:H11 str. 11368 chromosome, complete genome77.837 %Subject ←→ Query37.7614
NC_016822:1839739Shigella sonnei 53G, complete genome85.5974 %Subject ←→ Query37.9198
NC_013008:1761165Escherichia coli O157:H7 str. TW14359 chromosome, complete genome80.2206 %Subject ←→ Query38.2113
NC_013361:1896446Escherichia coli O26:H11 str. 11368 chromosome, complete genome80.1042 %Subject ←→ Query38.2296
NC_002655:1909139Escherichia coli O157:H7 EDL933, complete genome78.5355 %Subject ←→ Query38.4667
NC_011353:1761977Escherichia coli O157:H7 str. EC4115 chromosome, complete genome79.8131 %Subject ←→ Query38.5032
NC_011750:919953Escherichia coli IAI39 chromosome, complete genome75.7322 %Subject ←→ Query38.6045
NC_011205:329155Salmonella enterica subsp. enterica serovar Dublin str. CT_0202185384.1759 %Subject ←→ Query38.7596
NC_011742:585908Escherichia coli S88 chromosome, complete genome79.5956 %Subject ←→ Query38.828
NC_011353:261220Escherichia coli O157:H7 str. EC4115 chromosome, complete genome92.0282 %Subject ←→ Query38.9884
NC_013008:261226Escherichia coli O157:H7 str. TW14359 chromosome, complete genome92.0527 %Subject ←→ Query39.1965
NC_013941:261094Escherichia coli O55:H7 str. CB9615 chromosome, complete genome92.5705 %Subject ←→ Query39.1987
NC_016822:267758Shigella sonnei 53G, complete genome86.2408 %Subject ←→ Query39.2695
NC_011274:1129686Salmonella enterica subsp. enterica serovar Gallinarum str. 287/9183.0239 %Subject ←→ Query39.5488
NC_013361:1593543Escherichia coli O26:H11 str. 11368 chromosome, complete genome78.5018 %Subject ←→ Query40.2481
NC_014121:1822895Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete76.0172 %Subject ←→ Query40.59
NC_016845:1773416Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,75.6373 %Subject ←→ Query41.6817
NC_016846:24500Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,76.7586 %Subject ←→ Query43.5812
NC_009778:3832000Enterobacter sakazakii ATCC BAA-894, complete genome77.4816 %Subject Query45.4902
NC_009648:1487692Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome75.5116 %Subject Query49.6231
NC_009648:2465613*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome77.1569 %Subject Query50.7802