Pre_GI Gene

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Host: NC_013941 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013941:5317424 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
53174245318365942hypothetical proteinBLASTP
53183625318856495hypothetical proteinBLASTP
53188565319509654DNA adenine methylaseQuickGO ontologyBLASTP
53195065319832327hypothetical proteinBLASTP
53198295320224396Holliday junction resolvaseQuickGO ontologyBLASTP
53203875321202816KilA-N domain familyQuickGO ontologyBLASTP
53212825322199918hypothetical proteinBLASTP
53222135322965753antitermination protein QQuickGO ontologyBLASTP
53233885323600213cold-shock proteinQuickGO ontologyBLASTP
53239015324116216cold-shock proteinQuickGO ontologyBLASTP
53248695325084216Lysis protein S-like protein from lambdoid prophage QinQuickGO ontologyBLASTP
53250895325433345hypothetical proteinBLASTP
53253995325671273hypothetical proteinBLASTP
53257775326310534phage lysozymeQuickGO ontologyBLASTP
53263075326798492hypothetical proteinBLASTP
53271675327379213cold-shock proteinQuickGO ontologyBLASTP
53276515327881231hypothetical proteinBLASTP
53280545328227174GnsB proteinQuickGO ontologyBLASTP
53285235328729207hypothetical proteinBLASTP
53289835329303321hypothetical proteinBLASTP
53295635330111549prophage Qin DNA packaging protein NU1-like proteinQuickGO ontologyBLASTP
533004153320111971DNA packaging protein of prophageQuickGO ontologyBLASTP
53319955332201207head-stabilizing proteinQuickGO ontologyBLASTP
533219853337901593capsid protein of prophageQuickGO ontologyBLASTP
533378053352851506head-tail preconnector protein GP5QuickGO ontologyBLASTP
53353225335669348head decoration proteinQuickGO ontologyBLASTP
533572753367551029major head proteinQuickGO ontologyBLASTP
53368075337181375hypothetical proteinBLASTP
53371745337527354head-tail joining protein of prophageQuickGO ontologyBLASTP
53375395338117579prophage minor tail protein ZQuickGO ontologyBLASTP
53381145338509396permeases of the major facilitator superfamilyQuickGO ontologyBLASTP
53384875339257771tail component of prophageQuickGO ontologyBLASTP
53392735339695423tail component of prophageQuickGO ontologyBLASTP
53396775340111435minor tail protein TQuickGO ontologyBLASTP
534010453426652562tail length tape measure proteinQuickGO ontologyBLASTP
53426625342991330minor tail proteinQuickGO ontologyBLASTP
53429915343689699hypothetical proteinBLASTP
53436405344437798tail fiber component K of prophageQuickGO ontologyBLASTP
53443355344976642tail component of prophage CP-933KQuickGO ontologyBLASTP