Pre_GI Gene

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Host: NC_011601 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011601:1077548 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
10769071077650744tail assembly proteinQuickGO ontologyBLASTP
10775481078195648tail assembly proteinQuickGO ontologyBLASTP
10820401082639600outer membrane precursor LomQuickGO ontologyBLASTP
108270410840171314side tail fiber proteinQuickGO ontologyBLASTP
10840191084288270hypothetical proteinBLASTP
10844031084981579T3SS secreted effector NleINleG-like proteinQuickGO ontologyBLASTP
10853431086323981T3SS effector-like protein NleB-like proteinQuickGO ontologyBLASTP
10863841087376993T3SS secreted effector NleC-like proteinQuickGO ontologyBLASTP
10878451088543699T3SS secreted effector NleD-like proteinQuickGO ontologyBLASTP
108901810900461029TMAO reductase system periplasmic protein TorTQuickGO ontologyBLASTP
10900191090711693DNA-binding transcriptional regulator TorRQuickGO ontologyBLASTP
109084110920131173trimethylamine N-oxide TMAO reductase I cytochrome c-type subunitQuickGO ontologyBLASTP
109201310945592547trimethylamine N-oxide TMAO reductase I catalytic subunitQuickGO ontologyBLASTP
10945561095155600chaperone protein TorDQuickGO ontologyBLASTP
10955111095816306chaperone-modulator protein CbpMQuickGO ontologyBLASTP
10958161096736921curved DNA-binding protein CbpAQuickGO ontologyBLASTP
109727110985121242glucose-1-phosphataseinositol phosphataseQuickGO ontologyBLASTP
109870111000741374transposase of ISEc13QuickGO ontologyBLASTP