Pre_GI Gene

Some Help

Host: NC_011742 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011742:4962008 Escherichia coli S88 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
49614604962011552nucleic acid-binding protein e14 prophageQuickGO ontologyBLASTP
496200849631591152hypothetical proteinBLASTP
49631564963380225hypothetical proteinBLASTP
49633384964195858replication protein from phage originQuickGO ontologyBLASTP
49641984964686489hypothetical proteinBLASTP
49646534965012360hypothetical proteinBLASTP
49650094965398390Crossover junction endodeoxyribonuclease from phage originQuickGO ontologyBLASTP
49654184966215798hypothetical proteinBLASTP
49662174967212996hypothetical proteinBLASTP
49672264967978753antitermination protein Q Qin prophageQuickGO ontologyBLASTP
49683944968606213cold shock protein Qin prophageQuickGO ontologyBLASTP
49689074969122216cold shock protein Qin prophageQuickGO ontologyBLASTP
49698754970090216S lysis protein Qin prophageQuickGO ontologyBLASTP
49700744970646573hypothetical proteinBLASTP
49709684971501534membrane-associated lysozyme Qin prophageQuickGO ontologyBLASTP
49714984971995498hypothetical proteinBLASTP
49723594972571213cold shock protein Qin prophageQuickGO ontologyBLASTP
49728044973073270hypothetical proteinBLASTP
49731534973419267hypothetical proteinBLASTP
49737154973921207hypothetical proteinBLASTP
49744744974965492hypothetical proteinBLASTP
497496549770672103DNA packaging protein of prophage terminase large subunitQuickGO ontologyBLASTP
49770584977276219hypothetical proteinBLASTP
497720449787841581portal protein head-tail preconnector protein from prophageQuickGO ontologyBLASTP
497853749807562220ATP-dependent Clp protease proteolytic subunitQuickGO ontologyBLASTP
49807984981166369hypothetical proteinBLASTP
49811594981434276hypothetical proteinBLASTP
49814464982024579Minor tail protein Z GPZ of prophageQuickGO ontologyBLASTP
49820094982422414Minor tail protein UQuickGO ontologyBLASTP
49823584983176819Major tail protein VQuickGO ontologyBLASTP
49831954983623429minor tail component of prophageQuickGO ontologyBLASTP
49836324983961330minor tail protein T of prophageQuickGO ontologyBLASTP
498390349869983096tail length tape measure protein from prophageQuickGO ontologyBLASTP
49869984987327330Minor tail protein MQuickGO ontologyBLASTP
49873374988035699Minor tail protein LQuickGO ontologyBLASTP
49879984988783786tail fiber component K of prophageQuickGO ontologyBLASTP
49886814989328648Tail assembly protein I from prophageQuickGO ontologyBLASTP