Pre_GI: BLASTN Hits

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Query: NC_007778:3784104 Rhodopseudomonas palustris HaA2, complete genome

Start: 3784104, End: 3814565, Length: 30462

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_016027:2047954*2047954211021762264Gluconacetobacter xylinus NBRC 3288, complete genome3e-28135BLASTN svgBLASTP svg
NC_011757:5693584*5693584571331619733Methylobacterium chloromethanicum CM4, complete genome3e-28135BLASTN svgBLASTP svg
NC_015186:36502*365025988323382Acidiphilium multivorum AIU301, complete genome7e-26127BLASTN svgBLASTP svg
NC_007778:5079500*5079500510170222203Rhodopseudomonas palustris HaA2, complete genome1e-21113BLASTN svgBLASTP svg
NC_007958:2423335*2423335244565022316Rhodopseudomonas palustris BisB5, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_016024:156000*15600017748221483Candidatus Chloracidobacterium thermophilum B chromosome chromosome3e-1695.6BLASTN svgBLASTP svg
NC_020207:2240115*2240115226013620022Enterococcus faecium NRRL B-2354, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_014760:925933*92593395269126759Mycoplasma bovis PG45 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_019940:36607543660754368438423631Thioflavicoccus mobilis 8321 chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_011004:2507566*2507566253137523810Rhodopseudomonas palustris TIE-1, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_009667:19348181934818195721622399Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence6e-1487.7BLASTN svgBLASTP svg
NC_004463:69241506924150696442440275Bradyrhizobium japonicum USDA 110, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009077:3851203*3851203387313021928Mycobacterium sp. JLS, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_011527:12559981255998129002234025Coxiella burnetii CbuG_Q212, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_011528:14920001492000152159929600Coxiella burnetii CbuK_Q154, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015675:62763576276357633952063164Mesorhizobium opportunistum WSM2075 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_018691:1864796*1864796190445339658Alcanivorax dieselolei B5 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_019973:56506465650646569428443639Mesorhizobium australicum WSM2073, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_002973:72328*723289511822791Listeria monocytogenes str. 4b F2365, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_003212:57061*5706110108744027Listeria innocua Clip11262, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_004668:241352*24135226701725666Enterococcus faecalis V583, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_004668:3156247*3156247318179425548Enterococcus faecalis V583, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_012673:1540000*1540000156249622497Exiguobacterium sp. AT1b, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_012673:1650139*1650139166872118583Exiguobacterium sp. AT1b, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_012673:2023297*2023297204277319477Exiguobacterium sp. AT1b, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_015942:1711026*1711026173659925574Acidithiobacillus ferrivorans SS3 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_016011:59070*590708009921030Listeria ivanovii subsp. ivanovii PAM 55, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_010505:26576832657683268177424092Methylobacterium radiotolerans JCM 2831, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_011047:443475*44347548738743913Candidatus Phytoplasma mali, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_015161:162000*16200018601224013Deinococcus proteolyticus MRP chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_002696:3759551*3759551378932829778Caulobacter crescentus CB15, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_003902:461808*46180848465722850Xanthomonas campestris pv. campestris str. ATCC 33913, complete6e-1177.8BLASTN svgBLASTP svg
NC_007086:459934*45993448362323690Xanthomonas campestris pv. campestris str. 8004, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_008343:16317801631780165385622077Granulibacter bethesdensis CGDNIH1, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_010505:1205747*1205747122904923303Methylobacterium radiotolerans JCM 2831, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_010688:449649*44964947276723119Xanthomonas campestris pv. campestris, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_015259:1512563*1512563153812025558Polymorphum gilvum SL003B-26A1 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_003454:249304*24930426978820485Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete9e-1073.8BLASTN svgBLASTP svg
NC_013595:8553904*8553904857655422651Streptosporangium roseum DSM 43021, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_020301:669000*66900071117642177Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_014958:3346500*3346500337418227683Deinococcus maricopensis DSM 21211 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_007963:31729131729134102923739Chromohalobacter salexigens DSM 3043, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_010556:141374*14137416268521312Exiguobacterium sibiricum 255-15, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010556:26567*265674534518779Exiguobacterium sibiricum 255-15, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010556:2773396*2773396279691823523Exiguobacterium sibiricum 255-15, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010674:426256*42625645229426039Clostridium botulinum B str. Eklund 17B, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010723:420025*42002544661626592Clostridium botulinum E3 str. Alaska E43, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_018665:139646*13964615884819203Exiguobacterium antarcticum B7 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_018665:2563375*2563375258672623352Exiguobacterium antarcticum B7 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013967:13752551375255140950734253Haloferax volcanii DS2 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_011894:983572983572101559932028Methylobacterium nodulans ORS 2060, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_008022:1698431*1698431172170323273Streptococcus pyogenes MGAS10270, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007297:1639954*1639954166209922146Streptococcus pyogenes MGAS5005, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007296:1669995*1669995169259922605Streptococcus pyogenes MGAS6180, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006155:2084669*2084669210379619128Yersinia pseudotuberculosis IP 32953, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005810:1663672*1663672168742323752Yersinia pestis biovar Microtus str. 91001, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004088:2691565*2691565271495023386Yersinia pestis KIM, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003485:1707653*1707653172659918947Streptococcus pyogenes MGAS8232, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003143:2101902*2101902212009918198Yersinia pestis CO92, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008150:1384102*1384102140260518504Yersinia pestis Antiqua, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008686:13838911383891143076746877Paracoccus denitrificans PD1222 chromosome 1, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_015930:18969*189693942820460Lactococcus garvieae ATCC 49156, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015224:2061951*2061951208443822488Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_013421:1696746*1696746172309926354Pectobacterium wasabiae WPP163, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012471:20585922058592208007021479Streptococcus equi subsp. equi 4047, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011134:18548681854868187702422157Streptococcus equi subsp. zooepidemicus str. MGCS10565, complete2e-0765.9BLASTN svgBLASTP svg
NC_010465:2582080*2582080260359921520Yersinia pseudotuberculosis YPIII, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010159:2128157*2128157214655218396Yersinia pestis Angola, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009785:1895679*1895679191359917921Streptococcus gordonii str. Challis substr. CH1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007925:1448726*1448726147412025395Rhodopseudomonas palustris BisB18, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_007925:4756236*4756236477957123336Rhodopseudomonas palustris BisB18, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_009720:2424975*2424975244520720233Xanthobacter autotrophicus Py2, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_009725:496443*49644354991253470Bacillus amyloliquefaciens FZB42, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_012472:5239944*5239944525821718274Bacillus cereus 03BB102, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_012526:300126*30012632859928474Deinococcus deserti VCD115, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_012796:3600630*3600630368962888999Desulfovibrio magneticus RS-1, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_012880:1711062*1711062173095119890Dickeya dadantii Ech703, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_012912:1701231*1701231174963148401Dickeya zeae Ech1591, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_007645:6407370*6407370643016222793Hahella chejuensis KCTC 2396, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_007530:5197854*5197854521982221969Bacillus anthracis str. 'Ames Ancestor', complete genome9e-0763.9BLASTN svgBLASTP svg
NC_007519:1244198*1244198126883324636Desulfovibrio alaskensis G20 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_000964:521975*52197556193339959Bacillus subtilis subsp. subtilis str. 168, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_003997:5200805*5200805522349422690Bacillus anthracis str. Ames, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_004722:5381208*5381208540929928092Bacillus cereus ATCC 14579, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_005945:5202176*5202176522486522690Bacillus anthracis str. Sterne, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_005957:5203915*5203915522509921185Bacillus thuringiensis serovar konkukian str. 97-27, complete9e-0763.9BLASTN svgBLASTP svg
NC_006274:5267585*5267585529331825734Bacillus cereus E33L, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_006322:4149500*4149500418760938110Bacillus licheniformis ATCC 14580, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_006322:567987*56798759617928193Bacillus licheniformis ATCC 14580, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_006582:4256915*4256915428739230478Bacillus clausii KSM-K16, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_013235:1938889*1938889196008021192Nakamurella multipartita DSM 44233, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_013592:1668092*1668092170683538744Dickeya dadantii Ech586, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014976:2735423*2735423276136725945Bacillus subtilis BSn5 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015731:2148517*2148517217574427228Nitrosomonas sp. Is79A3 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_016047:637778*63777866096423187Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete9e-0763.9BLASTN svgBLASTP svg
NC_020244:516993*51699355115334161Bacillus subtilis XF-1, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_020410:495184*49518454162646443Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete9e-0763.9BLASTN svgBLASTP svg
NC_006270:4149004*4149004418759938596Bacillus licheniformis ATCC 14580, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_006270:568171*56817159638928219Bacillus licheniformis ATCC 14580, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_019842:484933*48493354277857846Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,9e-0763.9BLASTN svgBLASTP svg
NC_019896:3491000*3491000352473533736Bacillus subtilis subsp. subtilis str. BSP1 chromosome, complete9e-0763.9BLASTN svgBLASTP svg
NC_014976:1174430*1174430119919524766Bacillus subtilis BSn5 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014833:3667748*3667748368799920252Ruminococcus albus 7 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014833:1539678*1539678155896019283Ruminococcus albus 7 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_013729:2157785*2157785219409936315Kribbella flavida DSM 17836, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_013757:14996431499643151759917957Geodermatophilus obscurus DSM 43160, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014219:83888*8388810707623189Bacillus selenitireducens MLS10 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014335:5165211*5165211518430019090Bacillus cereus biovar anthracis str. CI chromosome, complete9e-0763.9BLASTN svgBLASTP svg
NC_014479:509919*50991953986229944Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete9e-0763.9BLASTN svgBLASTP svg
NC_014500:3097362*3097362318793090569Dickeya dadantii 3937 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014551:483773*48377350659922827Bacillus amyloliquefaciens DSM 7, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014666:84885678488567850749318927Frankia sp. EuI1c chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014829:178000*17800020009922100Bacillus cellulosilyticus DSM 2522 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_010520:3526883*3526883355123524353Clostridium botulinum A3 str. Loch Maree, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009943:1637582*1637582166083323252Candidatus Desulfococcus oleovorans Hxd3, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009883:14290001429000145248923490Rickettsia bellii OSU 85-389, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009720:2143124*2143124216762924506Xanthobacter autotrophicus Py2, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_003919:1203405*1203405123359930195Xanthomonas axonopodis pv. citri str. 306, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010674:3674739*3674739372221147473Clostridium botulinum B str. Eklund 17B, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010723:3530000*3530000357960049601Clostridium botulinum E3 str. Alaska E43, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_011883:1182000*1182000120391521916Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,4e-0661.9BLASTN svgBLASTP svg
NC_012121:139741*13974118060640866Staphylococcus carnosus subsp. carnosus TM300, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_012121:1444633*1444633146884124209Staphylococcus carnosus subsp. carnosus TM300, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_012121:1676367*1676367170109924733Staphylococcus carnosus subsp. carnosus TM300, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_014033:1062935*1062935108059917665Prevotella ruminicola 23 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_020291:6216000*6216000625247336474Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome4e-0661.9BLASTN svgBLASTP svg
NC_002951:2208813*2208813223209923287Staphylococcus aureus subsp. aureus COL, complete genome4e-0661.9BLASTN svgBLASTP svg