Pre_GI Gene

Some Help

Host: NC_007925 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007925:4756236 Rhodopseudomonas palustris BisB18, complete genome

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
475477347562391467protein of unknown function DUF463 YcjX-like proteinQuickGO ontologyBLASTP
475623647572821047conserved hypothetical protein 1620QuickGO ontologyBLASTP
47575554757755201cold-shock DNA-binding domain proteinQuickGO ontologyBLASTP
47579024758552651hypothetical protein
475898147620673087delta-1-pyrroline-5-carboxylate dehydrogenaseQuickGO ontologyBLASTP
476217047622841155S ribosomal RNAQuickGO ontologyBLASTP
47624424765288284723S ribosomal RNAQuickGO ontologyBLASTP
4765838476591376tRNA-AlaQuickGO ontologyBLASTP
4766079476615577tRNA-IleQuickGO ontology
47663784767866148916S ribosomal RNAQuickGO ontologyBLASTP
476876547708522088peptidase M23BQuickGO ontologyBLASTP
477095547725861632NHL repeatQuickGO ontologyBLASTP
477265247752912640ATPase AAA-2QuickGO ontologyBLASTP
47757384776421684hypothetical proteinBLASTP
47766684777531864alphabeta hydrolase foldQuickGO ontologyBLASTP
47776994778367669Methionine biosynthesis MetWQuickGO ontologyBLASTP
477836947795711203homoserine O-acetyltransferaseQuickGO ontologyBLASTP