Pre_GI Gene

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Host: NC_003902 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003902:461808 Xanthomonas campestris pv. campestris str. ATCC 33913, complete

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was originally isolated from cabbage. Causes black rot disease in crucifers. This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4618084628421035biotin synthaseQuickGO ontologyBLASTP
462886463617732competence protein FQuickGO ontologyBLASTP
4640144649199064-hydroxybenzoate octaprenyltransferaseQuickGO ontologyBLASTP
46518446526077tRNA-ArgQuickGO ontologyBLASTP
465420465866447phage-related integraseQuickGO ontologyBLASTP
466271467092822IS1481 transposaseQuickGO ontologyBLASTP
4674934696282136TonB-dependent receptorQuickGO ontologyBLASTP
470113470817705superoxidase dismutaseQuickGO ontologyBLASTP
470872471252381hypothetical proteinBLASTP
4725264751472622TonB-dependent receptorQuickGO ontologyBLASTP
4751984764931296isopenicillin N epimeraseQuickGO ontologyBLASTP
476652476915264IS1404 transposaseQuickGO ontologyBLASTP
4767294777541026IS1404 transposaseQuickGO ontologyBLASTP
478162478524363hypothetical proteinBLASTP
4790554815202466hypothetical proteinBLASTP
4825494846572109phosphoglycerol transferase IQuickGO ontologyBLASTP