Pre_GI Gene

Some Help

Host: NC_007086 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007086:459934 Xanthomonas campestris pv. campestris str. 8004, complete genome

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: The original was isolated from an inflected cauliflower in Sussex, United Kingdom, in 1958. Strain 8004 is a spontaneous rifampicin resistant strain. Causes black rot disease in crucifers. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
459934460695762biotin biosynthesis proteinQuickGO ontologyBLASTP
460727461062336hypothetical proteinBLASTP
46109546230012068-amino-7-oxononanoate synthaseQuickGO ontologyBLASTP
4624004634341035biotin synthaseQuickGO ontologyBLASTP
463478464209732competence protein FQuickGO ontologyBLASTP
4646064655119064-hydroxybenzoate octaprenyltransferaseQuickGO ontologyBLASTP
46577646585277tRNA-ArgQuickGO ontologyBLASTP
466012466458447phage-related integraseQuickGO ontologyBLASTP
4680844702192136TonB-dependent receptorQuickGO ontologyBLASTP
470276470632357hypothetical proteinBLASTP
470704471408705superoxidase dismutaseQuickGO ontologyBLASTP
471463471843381hypothetical proteinBLASTP
4731174757262610TonB-dependent receptorQuickGO ontologyBLASTP
4758334772001368IS1478 transposaseQuickGO ontologyBLASTP
4773014785961296isopenicillin N epimeraseQuickGO ontologyBLASTP
478755479018264IS1404 transposase protein AQuickGO ontologyBLASTP
4788324798571026IS1404 transposase protein BQuickGO ontologyBLASTP
480265480627363hypothetical proteinBLASTP
4811584836232466hypothetical proteinBLASTP