Pre_GI Gene

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Host: NC_011883 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011883:1182000 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,

Host Lineage: Desulfovibrio desulfuricans; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 was isolated from the rumen of a sheep. D. desulfuricans reduces sulfate to sulfide found in soil, freshwater, saltwater and the intestinal tract of animals. This organism grows anaerobically and utilizes a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite, as well as others. The nitrate reduction pathway is not expressed while sulfate is available. Alternatively, the sulfate reduction pathway is constitutively expressed when the cells are growing with nitrate reduction. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making this organism of interest as bioremediator. Metal corrosion, a problem that is partly the result of the collective activity of this bacterium, results in billions of dollars in losses each year to the petroleum industry. This organism is responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
118249011849282439glycosyl transferase group 1QuickGO ontologyBLASTP
118495411884213468Methyltransferase type 11QuickGO ontologyBLASTP
118843311895511119UDP-N-acetylglucosamine 2-epimeraseQuickGO ontologyBLASTP
11896111190558948LicD family proteinQuickGO ontologyBLASTP
11907601191374615HAD-superfamily hydrolase subfamily IB PSPase-likeQuickGO ontologyBLASTP
11913321191970639hypothetical proteinBLASTP
11919731192608636Methyltransferase type 12QuickGO ontology
11925981193314717aspartate racemaseQuickGO ontologyBLASTP
1194358119443376tRNA-LysQuickGO ontology
119451811965332016cytochrome c biogenesis protein transmembrane regionQuickGO ontologyBLASTP
11966681197144477CheW proteinQuickGO ontologyBLASTP
11976831198201519GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
11981761198406231hypothetical protein
119848612012542769Radical SAM domain proteinQuickGO ontologyBLASTP
12016591202000342hypothetical proteinBLASTP
12021021202833732Ribonuclease IIIQuickGO ontologyBLASTP
12030071203915909flagellin domain proteinQuickGO ontologyBLASTP