Pre_GI: BLASTP Hits

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Query: NC_017168:3977767:3983530 Yersinia pestis A1122 chromosome, complete genome

Start: 3983530, End: 3983850, Length: 321

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2586729:259249225924922592812321Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,transposase2e-57220
NC_009381:1682000:168942416894241689744321Yersinia pestis Pestoides F chromosome, complete genometransposase2e-57220
NC_005810:1467772:150412615041261504446321Yersinia pestis biovar Microtus str. 91001, complete genomeputative transposase2e-57220
NC_008149:2802392:280815528081552808475321Yersinia pestis Nepal516, complete genometransposase2e-57220
NC_004088:2966331:297209429720942972414321Yersinia pestis KIM, complete genometransposase2e-57220
NC_008150:844727:889085889085889405321Yersinia pestis Antiqua, complete genomeputative transposase2e-57220
NC_013421:2613137:262804226280422628872831Pectobacterium wasabiae WPP163, complete genome5e-30129
NC_003277:22257:3292932929339661038Salmonella typhimurium LT2 plasmid pSLT, complete sequenceputative integrase protein6e-29125
NC_016861:22256:3292232922339591038Salmonella enterica subsp. enterica serovar Typhimurium strputative integrase6e-29125
NC_009786:43331:592285922860046819Escherichia coli E24377A plasmid pETEC_80, complete sequence6e-27119
NC_007384:2007467:2014725201472520157561032Shigella sonnei Ss046, complete genomeIS630 ORF1e-26118
NC_007384:1737885:1748054174805417490851032Shigella sonnei Ss046, complete genomeIS630 ORF1e-26118
NC_007384:307013:3185883185883196191032Shigella sonnei Ss046, complete genomeIS630 ORF1e-26118
NC_007384:3383983:3383983338398333850141032Shigella sonnei Ss046, complete genomeIS630 ORF1e-26118
NC_016822:1818897:1827376182737618284071032Shigella sonnei 53G, complete genomeIS630 orf1e-26118
NC_016822:3282654:3298701329870132997321032Shigella sonnei 53G, complete genomeIS630 orf1e-26118
NC_005126:5188976:5188976518897651899891014Photorhabdus luminescens subsp. laumondii TTO1, complete genomeTransposase, IS630 family1e-26118
NC_012214:745302:7522477522477532871041Erwinia pyrifoliae Ep1/96, complete genometransposase9e-27118
NC_012214:537000:5410455410455420851041Erwinia pyrifoliae Ep1/96, complete genometransposase9e-27118
NC_016822:3485631:3497894349789434989251032Shigella sonnei 53G, complete genomeIS630 orf2e-26117
NC_009438:236424:2372692372692383001032Shewanella putrefaciens CN-32 chromosome, complete genomeIS630 orf9e-26115
NC_009348:3819271:3831763383176338327941032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase2e-25114
NC_009348:1663870:1679917167991716809481032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase2e-25114
NC_009348:1347500:1354117135411713551481032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase2e-25114
NC_017319:192482:195688195688196644957Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceIS630 ORF2e-25114
NC_004851:191709:195760195760196716957Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceIS630 ORF2e-25114
NC_007385:157516:1607221607221617531032Shigella sonnei Ss046 plasmid pSS_046, complete sequenceIS630 ORF1e-25114
NC_009348:2247500:2274776227477622758071032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase3e-25113
NC_009348:2631759:2642233264223326432641032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase3e-25113
NC_009348:2034500:2045224204522420462551032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase3e-25113
NC_009348:3261500:3270842327084232718731032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase3e-25113
NC_009348:3261500:3268688326868832697191032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase3e-25113
NC_009348:4135002:4157632415763241586631032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase3e-25113
NC_009348:2362163:2381760238176023827911032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase3e-25113
NC_009348:1475955:1480996148099614820271032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase3e-25113
NC_009348:161244:1691281691281701591032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase3e-25113
NC_009348:1968826:1977019197701919780501032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase3e-25113
NC_009350:6987:96149614106451032Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completeIS630 family transposase1e-24112
NC_012779:2856051:286125928612592862020762Edwardsiella ictaluri 93-146, complete genomehypothetical protein6e-24109
NC_012779:2424967:243549724354972436486990Edwardsiella ictaluri 93-146, complete genomehypothetical protein7e-23105
NC_016745:1719800:1728949172894917299801032Oceanimonas sp. GK1 chromosome, complete genomeIS630 family transposase3e-22103
NC_016745:2280375:2291970229197022930011032Oceanimonas sp. GK1 chromosome, complete genomeIS630 family transposase3e-22103
NC_012691:2050957:2054975205497520559941020Tolumonas auensis DSM 9187, complete genometransposase, putative5e-22102
NC_012691:1144715:1153221115322111542401020Tolumonas auensis DSM 9187, complete genometransposase, putative5e-22102
NC_009708:915814:924763924763925350588Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeIS630 family transposase8e-2199
AP010958:3627355:364082536408253641670846Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-2097.8
AP010958:5090696:510537051053705106215846Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-2097.8
NC_002655:3919545:393301739330173933862846Escherichia coli O157:H7 EDL933, complete genomeputative transposase2e-2097.8
NC_011353:3956630:397010139701013970946846Escherichia coli O157:H7 str. EC4115 chromosome, complete genome2e-2097.8
NC_013008:3911356:392482739248273925672846Escherichia coli O157:H7 str. TW14359 chromosome, complete genometransposase2e-2097.8
NC_013353:3627355:364082536408253641670846Escherichia coli O103:H2 str. 12009, complete genome2e-2097.8
NC_013353:5090696:510537051053705106215846Escherichia coli O103:H2 str. 12009, complete genome2e-2097.8
NC_002695:3852233:386576138657613866549789Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-2097.4
NC_013364:5083949:509798450979845098829846Escherichia coli O111:H- str. 11128, complete genome3e-1994
NC_013364:3701895:371511737151173715728612Escherichia coli O111:H- str. 11128, complete genome5e-1889.7
NC_010660:175200:178851178851179033183Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence2e-1580.9
NC_016816:2684336:270954227095422710033492Pantoea ananatis LMG 5342, complete genomeIS630 family transposase2e-1477.4
NC_007608:97092:100298100298100906609Shigella boydii Sb227 plasmid pSB4_227, complete sequenceIS630 ORF7e-1475.9
NC_016831:4517850:452384745238474524347501Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-1272
NC_011205:4718239:472403647240364724536501Salmonella enterica subsp. enterica serovar Dublin str. CT_020218531e-1272
NC_010102:4745949:474832947483294748829501Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1271.6
NC_013956:3181421:318898531889853189218234Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein1e-1168.6
NC_002655:2264773:227403322740332274284252Escherichia coli O157:H7 EDL933, complete genomeputative transposase (partial)1e-1065.5
NC_013941:3676146:368999936899993690463465Escherichia coli O55:H7 str. CB9615 chromosome, complete genometransposase4e-1063.5
NC_019892:429975:4391354391354401781044Singulisphaera acidiphila DSM 18658 chromosome, complete genometransposase1e-0858.5
NC_019892:2684793:2697235269723526982781044Singulisphaera acidiphila DSM 18658 chromosome, complete genometransposase2e-0857.8
NC_019892:2684793:2706311270631127073541044Singulisphaera acidiphila DSM 18658 chromosome, complete genometransposase2e-0857.8
NC_004347:4441110:445477544547754455032258Shewanella oneidensis MR-1, complete genomehypothetical protein2e-0651.2
NC_008095:6143738:6152404615240461535011098Myxococcus xanthus DK 1622, complete genometransposase, IS630 family2e-0651.2
NC_004459:3243987:325986532598653260188324Vibrio vulnificus CMCP6 chromosome I, complete sequenceTransposase8e-0649.3