Pre_GI: BLASTP Hits

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Query: NC_012668:2744393:2747667 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 2747667, End: 2747978, Length: 312

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009457:351512:406567406567406878312Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein1e-43174
NC_004459:349500:353683353683354036354Vibrio vulnificus CMCP6 chromosome I, complete sequencehypothetical protein2e-32137
NC_012880:3748665:377311037731103773403294Dickeya dadantii Ech703, complete genomeprotein of unknown function UPF01253e-22103
NC_016745:1548426:156415815641581564499342Oceanimonas sp. GK1 chromosome, complete genomehypothetical protein4e-22103
NC_012912:3749156:375463337546333754926294Dickeya zeae Ech1591, complete genomeprotein of unknown function UPF01254e-2096.7
NC_012214:1117325:113272011327201133007288Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein8e-2095.5
CP002516:1165726:118062611806261180916291Escherichia coli KO11, complete genomeprotein of unknown function UPF01251e-1995.1
NC_009800:2788164:279428527942852794575291Escherichia coli HS, complete genomeRnfH family protein1e-1995.1
AC_000091:2747520:275266427526642752954291Escherichia coli W3110 DNA, complete genomehypothetical protein1e-1995.1
CU928145:2973968:297714529771452977435291Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein1e-1995.1
NC_000913:2746886:275203027520302752320291Escherichia coli K12, complete genomehypothetical protein1e-1995.1
CU928160:2818750:282096328209632821253291Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein1e-1995.1
NC_010473:2839902:284379528437952844085291Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein1e-1995.1
NC_009801:2898426:290434129043412904631291Escherichia coli E24377A, complete genomeRnfH family protein1e-1995.1
NC_017328:2785309:279143027914302791804375Shigella flexneri 2002017 chromosome, complete genomehypothetical protein1e-1995.1
NC_008258:2905413:291632729163272916701375Shigella flexneri 5 str. 8401, complete genomehypothetical protein1e-1995.1
NC_008228:2068641:208067620806762081002327Pseudoalteromonas atlantica T6c, complete genomeprotein of unknown function UPF01251e-1995.1
NC_011748:2973968:297714529771452977435291Escherichia coli 55989, complete genomehypothetical protein1e-1995.1
CP002185:2919752:292494129249412925231291Escherichia coli W, complete genomepredicted protein1e-1995.1
AP010958:3238742:324263232426323242922291Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein1e-1995.1
NC_004337:2747917:275254827525482752838291Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-1995.1
NC_004741:2741971:274718127471812747471291Shigella flexneri 2a str. 2457T, complete genomehypothetical protein1e-1995.1
NC_016902:1165726:118062611806261180916291Escherichia coli KO11FL chromosome, complete genomehypothetical protein1e-1995.1
NC_013364:3312379:331459233145923314882291Escherichia coli O111:H- str. 11128, complete genomehypothetical protein1e-1995.1
NC_013361:3597812:360295636029563603246291Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein1e-1995.1
NC_013353:3238742:324263232426323242922291Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-1995.1
NC_012967:2669182:267530326753032675593291Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein1e-1995.1
NC_012947:1106000:111920411192041119494291Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein1e-1995.1
NC_012759:2633949:263784226378422638132291Escherichia coli BW2952 chromosome, complete genomehypothetical protein1e-1995.1
NC_011741:2818750:282096328209632821253291Escherichia coli IAI1 chromosome, complete genomehypothetical protein1e-1995.1
NC_011415:3006794:301284030128403013130291Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-1995.1
NC_002655:3538656:354386635438663544174309Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-1994.7
NC_002695:3468873:347401734740173474325309Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-1994.7
NC_011353:3573641:357812535781253578415291Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein2e-1994.7
NC_013008:3525428:353300235330023533292291Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-1994.7
NC_010498:2847359:284957228495722849862291Escherichia coli SMS-3-5, complete genomeRnfH family protein1e-1994.7
NC_011750:2928990:293120329312032931493291Escherichia coli IAI39 chromosome, complete genomehypothetical protein1e-1994.7
NC_011740:448000:461044461044461334291Escherichia fergusonii ATCC 35469, complete genomehypothetical protein2e-1994
NC_012691:2476223:248215224821522482451300Tolumonas auensis DSM 9187, complete genomeprotein of unknown function UPF01253e-1994
NC_004431:3012668:301659430165943016902309Escherichia coli CFT073, complete genomehypothetical protein3e-1993.6
NC_007946:2894793:289809628980962898404309Escherichia coli UTI89, complete genomeprotein YfjF3e-1993.6
NC_009436:3367194:337330233733023373589288Enterobacter sp. 638, complete genomehypothetical protein7e-1992.4
NC_006512:952894:953940953940954317378Idiomarina loihiensis L2TR, complete genomehypothetical protein1e-1892
NC_007712:3067000:307024530702453070529285Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-1892
NC_009792:3665369:367146836714683671758291Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-1891.3
NC_016514:3573400:357861135786113578898288Enterobacter cloacae EcWSU1 chromosome, complete genomeRnfH2e-1890.9
NC_014121:4043198:404934940493494049618270Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein3e-1890.5
NC_015224:3587500:359297835929783593262285Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein6e-1889.4
NC_020418:1841138:184438318443831844682300Morganella morganii subsp. morganii KT, complete genomeUPF0125 protein yfjF8e-1889
NC_016612:28451:306683066830958291Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein1e-1788.6
NC_012559:731859:746863746863747189327Laribacter hongkongensis HLHK9, complete genomeUPF0125 protein CV_34621e-1788.6
NC_013508:2870954:287597928759792876263285Edwardsiella tarda EIB202, complete genomehypothetical protein2e-1787.4
NC_012779:2957000:296098329609832961258276Edwardsiella ictaluri 93-146, complete genomehypothetical protein5e-1786.7
NC_009778:567000:605019605019605309291Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-1786.7
NC_009648:3224495:322979732297973230087291Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein4e-1786.7
NC_016845:4077293:409678240967824097072291Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein4e-1786.7
NC_004088:3382148:338747233874723387756285Yersinia pestis KIM, complete genomehypothetical protein5e-1786.3
NC_005810:1130251:113557511355751135859285Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein5e-1786.3
NC_003143:1233128:124707012470701247354285Yersinia pestis CO92, complete genomehypothetical protein5e-1786.3
NC_008149:3251196:325652032565203256804285Yersinia pestis Nepal516, complete genomehypothetical protein5e-1786.3
NC_010634:1342393:135851513585151358799285Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein5e-1786.3
NC_008150:650899:663806663806664090285Yersinia pestis Antiqua, complete genomehypothetical protein5e-1786.3
NC_010159:1417993:143122214312221431506285Yersinia pestis Angola, complete genomehypothetical protein5e-1786.3
NC_009381:2939782:294510629451062945390285Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein5e-1786.3
NC_017168:4155143:416908641690864169370285Yersinia pestis A1122 chromosome, complete genomehypothetical protein5e-1786.3
NC_017265:1136000:114840011484001148684285Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein5e-1786.3
NC_016818:3736213:374299137429913743275285Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein7e-1785.9
NC_012917:833721:846912846912847202291Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein9e-1785.5
NC_016614:686887:690743690743691006264Vibrio sp. EJY3 chromosome 2, complete sequencehypothetical protein1e-1684.7
NC_004547:913553:928432928432928713282Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-1684.3
NC_017047:3793000:379664437966443796928285Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein3e-1683.6
NC_015061:3725921:373198337319833732267285Rahnella sp. Y9602 chromosome, complete genomehypothetical protein3e-1683.6
NC_020064:3609844:361532636153263615610285Serratia marcescens FGI94, complete genomehypothetical protein5e-1682.8
NC_015381:2859000:292031029203102920633324Burkholderia gladioli BSR3 chromosome 1, complete sequenceTGS domain-containing protein1e-1581.6
NC_008800:1090000:111771911177191117952234Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein1e-1478.6
NC_013959:826868:850126850126850407282Sideroxydans lithotrophicus ES-1 chromosome, complete genomeprotein of unknown function UPF01251e-1375.1
NC_007912:3466966:346794634679463468272327Saccharophagus degradans 2-40, complete genomehypothetical protein1e-1272
NC_013194:4964000:497832249783224978600279Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeprotein of unknown function UPF01253e-1270.5
NC_008027:775896:801663801663801971309Pseudomonas entomophila L48, complete genomehypothetical protein5e-1269.7
NC_015709:1459838:151352615135261513798273Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completehypothetical protein6e-1269.3
NC_010506:1893000:189755318975531897885333Shewanella woodyi ATCC 51908, complete genomeprotein of unknown function UPF01252e-1168.2
NC_015276:565701:584378584378584668291Marinomonas mediterranea MMB-1 chromosome, complete genomeProtein rnfH3e-1167
NC_020209:3874844:387543838754383875740303Pseudomonas poae RE*1-1-14, complete genomehypothetical protein7e-1062.8
NC_014366:2826575:283838328383832838709327Gamma proteobacterium HdN1, complete genomehypothetical protein2e-0961.2
NC_005773:4797242:480090448009044801218315Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein2e-0961.2
NC_004757:427483:467402467402467713312Nitrosomonas europaea ATCC 19718, complete genomehypothetical protein4e-0960.1
NC_007005:4992730:499637349963734996687315Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein2e-0754.3